| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700368
Identifier: 126700368
GI number: 126700368
Start: 3195904
End: 3196569
Strand: Direct
Name: 126700368
Synonym: CD2752
Alternate gene names: NA
Gene position: 3195904-3196569 (Clockwise)
Preceding gene: 126700351
Following gene: 126700379
Centisome position: 74.49
GC content: 25.68
Gene sequence:
>666_bases TTGAAAGGAAACATAGTACAATATAATTTTGCAGATATAGAGGAAGAAGTATATTCGTTGGATTATGCTATAGCATGGAA TACAAACGAGGAAAACGTAAACATAATACCATTTACAAATAAATTCTGTAAAGAATCTATAGAATCTTTTTGCCTAGGTA AAATTAATAACTTTGTTGAAATATTAAATGAAGGTTTTGTTGAAAATCATCATTATGTACATTTAGATAAAATGATTAGT GTTCCTAAGAAAAAGGTTAATTTAGTATATCAACAAGACACACATGGTTATCTTCTAAGAGATGATAATGACAACCTTAT TCCTGCAAAAATAACTTCAGAGCAATCTAAATCTATATCAAGTAAGATGGAGTTATTCTGTGCTGGTGAAGAAAAATGTT TAATTAATATATTACTAAAGGCTGACCCATCATATATTTTAGATGTAGATAGTATAAAAGACAAAAACATTCTAAATCTA GGTTATGAGTCTATTGACAGATATAAAGAATACAATTTTGATGATGATAAGATTTTAATATTTTTTATAAATAAAAAACG TTATTCAGTGATTATGAAAAAAACAAACAACTCTGATAACGATTTAGTTTCCAGAAACAATGCTATTAAAGAATTATTTA CTAATAAAGCAGGAAATCTTAACTAA
Upstream 100 bases:
>100_bases ATTTACTATATCATATTTATTCAATTTATGATATTATTTAAATATAATATAAGTTTTATAAAGTATATTAAATATATTAT AAGATGGAGGTCGAGTAATT
Downstream 100 bases:
>100_bases TAATATAATTTTAAATTATGTTATTGATTAAATTAATAATAGTATACAAAGAGGCTGTCTCAAAATAGAGATAAGCTTCT TTTTCATTGTTGAAATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKGNIVQYNFADIEEEVYSLDYAIAWNTNEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMIS VPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNL GYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
Sequences:
>Translated_221_residues MKGNIVQYNFADIEEEVYSLDYAIAWNTNEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMIS VPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNL GYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN >Mature_221_residues MKGNIVQYNFADIEEEVYSLDYAIAWNTNEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMIS VPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNL GYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25633; Mature: 25633
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGNIVQYNFADIEEEVYSLDYAIAWNTNEENVNIIPFTNKFCKESIESFCLGKINNFVE CCCCEEEEEHHHHHHHHHEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSIS HHHCCCCCCCCEEEEHHHHHCCCCCEEEEEEECCCCEEEECCCCCEEEEEECCHHHHHHH SKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILI HHEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCEEECCHHHHHHHHCCCCCCCEEEE FFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN EEECCCEEEEEEEECCCCCCHHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKGNIVQYNFADIEEEVYSLDYAIAWNTNEENVNIIPFTNKFCKESIESFCLGKINNFVE CCCCEEEEEHHHHHHHHHEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH ILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSIS HHHCCCCCCCCEEEEHHHHHCCCCCEEEEEEECCCCEEEECCCCCEEEEEECCHHHHHHH SKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILI HHEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCEEECCHHHHHHHHCCCCCCCEEEE FFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN EEECCCEEEEEEEECCCCCCHHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA