| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is thlA2 [H]
Identifier: 126700290
GI number: 126700290
Start: 3092064
End: 3093242
Strand: Direct
Name: thlA2 [H]
Synonym: CD2676
Alternate gene names: 126700290
Gene position: 3092064-3093242 (Clockwise)
Preceding gene: 126700288
Following gene: 126700291
Centisome position: 72.07
GC content: 35.79
Gene sequence:
>1179_bases ATGAAAGATGTAGTAATCGTATCAGCAGTCAGAACACCTATAGGAAGTTTTGGAGGTGTATTTAAAAATACTTCAGCTGT TCAACTTGGAACTATCGCTGTTAAAGAAGCGATATCACGTGTAGGACTTAATTTATCTGAAATAGATGAAGTAATAATTG GAAATGTTCTTCAAACAGGGCTTGGACAGAATGTTGCTAGACAAATTGCTATAAATGCAGGTATACCAAATTCTGTTCCA AGCTACACAGTAAATAAATTATGTGGTTCAGGGCTTAAAAGTGTCCAGCTAGCTGCCCAATCAATCACATCTGGTGAAAA TGATGTGGTAATTGCAGGTGGTACTGAAAATATGAGTCAAGCTCCTTATATCGTTCCAACTGCTCGCTTTGGTAGTAAAA TGGGTAACATAACCATGGTAGATAGTATGCTAACAGATGGCCTTATTGATGCTTTCAATCAGTATCATATGGGAATAACT GCAGAAAATATTGCAACTAAATTTGAATTTACTAGAGAAATGCAAGATAAATTGGCATTAGAAAGTCAAAATAAGGCTGA GAATGCTATAAAAAACAACCGCTTTAAAGAAGAAATCGTTCCAGTAGATGTTTTAATACGTCGAGGAAAAATAGAAACTA TTGATAAAGATGAATATCCTAAATTAGGTATGACATTTGAAGGTTTATCTAAACTTAAACCTGCATTCAAAAAAGATGGT ACTGTAACAGCTGGAAATGCCTCAGGTATTAATGATGGTGCGGCTATGTTAATACTAATGAGCCAACAAAAAGCAGACGA ACTAGGTATTAGACCACTTGCTAAAATAAAATCCTATGCTTCAGCTGGTGTTGAACCTGAAGTCATGGGTACTGGTCCAA TCCCTGCAACTAGAAAAGCACTGAAAAAAGCTGGACTTAGCATCAATGATATAGACTTAATAGAAGCAAATGAAGCGTTT GCTGCCCAAGCATTAGCTGTTAAAAATGAACTTCAAATAGATTCATCAAAGTTAAATGTTAATGGTGGTGCAATAGCATT AGGACATCCAATAGGAGCAAGTGGAGCTAGAATACTTGTTACCTTAATTTATGAAATGCAAAAACGTAAAGTTGAAACTG GACTTGCAACACTTTGTATTGGTGGTGGTCAAGGAATATCAATGGTGGTTTCACGATAG
Upstream 100 bases:
>100_bases AAAAACAAGCTTGTATTAAAAAAGTACTTTATTATAGTGTTCCCTAATTTCTTTATTCAGAAAATTTTTAATTATCATTC AAGAAAGGTAACTATTAGAT
Downstream 100 bases:
>100_bases GAGGAAATATGAATAAAATAGTTAGCATTGATGAAGCTCTATCTCATGTAAAAGATGGAGATACAATAATGGTTGGTGGA TTCATGGCCAATGGTTCACC
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP SYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGIT AENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDG TVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANEAF AAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR
Sequences:
>Translated_392_residues MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP SYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGIT AENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDG TVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANEAF AAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR >Mature_392_residues MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP SYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGIT AENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDG TVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANEAF AAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=391, Percent_Identity=52.4296675191816, Blast_Score=411, Evalue=1e-115, Organism=Homo sapiens, GI167614485, Length=391, Percent_Identity=45.7800511508951, Blast_Score=357, Evalue=9e-99, Organism=Homo sapiens, GI4557237, Length=393, Percent_Identity=42.7480916030534, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI4501853, Length=396, Percent_Identity=42.4242424242424, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI4504327, Length=426, Percent_Identity=32.3943661971831, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI194353979, Length=390, Percent_Identity=30.2564102564103, Blast_Score=152, Evalue=4e-37, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=54.8469387755102, Blast_Score=448, Evalue=1e-127, Organism=Escherichia coli, GI1788554, Length=393, Percent_Identity=60.0508905852417, Blast_Score=446, Evalue=1e-126, Organism=Escherichia coli, GI1787663, Length=400, Percent_Identity=44, Blast_Score=323, Evalue=9e-90, Organism=Escherichia coli, GI48994986, Length=400, Percent_Identity=42, Blast_Score=291, Evalue=3e-80, Organism=Escherichia coli, GI1788683, Length=409, Percent_Identity=32.2738386308068, Blast_Score=198, Evalue=6e-52, Organism=Caenorhabditis elegans, GI133906874, Length=392, Percent_Identity=45.9183673469388, Blast_Score=353, Evalue=8e-98, Organism=Caenorhabditis elegans, GI17535921, Length=393, Percent_Identity=43.0025445292621, Blast_Score=303, Evalue=1e-82, Organism=Caenorhabditis elegans, GI25147385, Length=392, Percent_Identity=39.7959183673469, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17551802, Length=427, Percent_Identity=32.0843091334895, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17535917, Length=394, Percent_Identity=33.502538071066, Blast_Score=196, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6325229, Length=396, Percent_Identity=45.959595959596, Blast_Score=327, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6322031, Length=395, Percent_Identity=38.7341772151899, Blast_Score=232, Evalue=1e-61, Organism=Drosophila melanogaster, GI24655093, Length=392, Percent_Identity=52.8061224489796, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI17648125, Length=391, Percent_Identity=43.9897698209719, Blast_Score=338, Evalue=4e-93, Organism=Drosophila melanogaster, GI24640423, Length=391, Percent_Identity=43.4782608695652, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI17137578, Length=426, Percent_Identity=30.7511737089202, Blast_Score=186, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 41376; Mature: 41376
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00098 THIOLASE_1 ; PS00737 THIOLASE_2 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTG CCCEEEEEEHHCCCHHHCCHHCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC LGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQ CCHHHHHHEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC APYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLAL CCEEEEEHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHH ESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDG CCCHHHHHHHHCCCHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHCCC TVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKA CEEECCCCCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHH LKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILV HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCEEEECCCEEEECCCCCCCCHHHHH TLIYEMQKRKVETGLATLCIGGGQGISMVVSR HHHHHHHHHHHHCCEEEEEECCCCCCEEEECC >Mature Secondary Structure MKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTG CCCEEEEEEHHCCCHHHCCHHCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC LGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQ CCHHHHHHEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC APYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLAL CCEEEEEHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHH ESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDG CCCHHHHHHHHCCCHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHCCC TVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKA CEEECCCCCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHH LKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILV HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCEEEECCCEEEECCCCCCCCHHHHH TLIYEMQKRKVETGLATLCIGGGQGISMVVSR HHHHHHHHHHHHCCEEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]