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The map label for this gene is agrA [H]

Identifier: 126700223

GI number: 126700223

Start: 3012145

End: 3012891

Strand: Direct

Name: agrA [H]

Synonym: CD2603

Alternate gene names: 126700223

Gene position: 3012145-3012891 (Clockwise)

Preceding gene: 126700212

Following gene: 126700227

Centisome position: 70.21

GC content: 22.76

Gene sequence:

>747_bases
GTGGATATATTAATCTTTGATAATGATGTTTGTTTTGGAATGAAACTAAAAGAAAAAATAAATAATATTTTAATAAAAGA
AGGTTTTGATAATGATGTTGTAAGATTATATCATAATGCAAATTTGTTATTAAAAGAGCTTACTGAAAAAAATAAAGTAA
GAATATATTTTATAGTTGTAGACGCAAAATATAAGATAAGTAATGAATTATGTGATGGATTATGGATAGCACAAAAAATT
AGAGAATCAGATTATATTAGTCCAATCATATTTCTTACAAATCATATAGAAATGATTTTAGGGATCTTCGATTATAGGTT
AGAAGTTATGGACTTTATACTAAAACATGATATGGAAATTGCTGAAAGTAAAATAAAAGCTTGTATTAAAATTGCTCACA
AAAGATACATTAAAGAAAAAAATTATCGCTCTAATTTTTTTACTATCTATTCAGATTTCTCACTATGGAAAATTTCATTT
GATGAAGTTATATATTTTGAAACAAGCACTATTCCACATAAAATAAAATTAGTGACTACTTCTAGAATATTTGAATTCTA
TAAAAGTTTAAAGTCTTTACCAGATTTAGATGCATGCTTTATCCGTGTACATAAATCTTTTGTAGTTAATAAATATCATA
TTGTTTCTCTCGACCTAAAGAAAAATAATATTAAAATGAGTAATGGCCATATATGTCGTATATCTAATACATATAGAAAT
ATTTTAAAGAATATTATTAAAACATAA

Upstream 100 bases:

>100_bases
AACTATCCTTAATCTTATTTATCTCCTAGTGTTATTTTATGTATTTTCTATAAAATACTTTTGTTTTTTTACTTTTGAAT
TTTTTATAGGAGGGTATTTA

Downstream 100 bases:

>100_bases
TAAATAGAAAAAGGAGATGTCTCAAGATAAAAATTTGAACCATCTCTTTTTTATACAAAAAGAGTAATCCCTAAGAATCC
TCTATATAATAATCATATTG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVVDAKYKISNELCDGLWIAQKI
RESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEIAESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISF
DEVIYFETSTIPHKIKLVTTSRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
ILKNIIKT

Sequences:

>Translated_248_residues
MDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVVDAKYKISNELCDGLWIAQKI
RESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEIAESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISF
DEVIYFETSTIPHKIKLVTTSRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
ILKNIIKT
>Mature_248_residues
MDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVVDAKYKISNELCDGLWIAQKI
RESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEIAESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISF
DEVIYFETSTIPHKIKLVTTSRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
ILKNIIKT

Specific function: Required for high-level post-exponential phase expression of a series of secreted proteins [H]

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 29443; Mature: 29443

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVV
CEEEEECCCEEECCHHHHHHHHEEEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEEEEE
DAKYKISNELCDGLWIAQKIRESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEI
ECCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISFDEVIYFETSTIPHKIKLVTT
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECEEEEEECCCCCEEEEEEEH
SRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEEEEECCCEEECCCCEEEECHHHHH
ILKNIIKT
HHHHHHCC
>Mature Secondary Structure
MDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVV
CEEEEECCCEEECCHHHHHHHHEEEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEEEEE
DAKYKISNELCDGLWIAQKIRESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEI
ECCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISFDEVIYFETSTIPHKIKLVTT
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECEEEEEECCCCCEEEEEEEH
SRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEEEEECCCEEECCCCEEEECHHHHH
ILKNIIKT
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA