Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is fbpA [H]

Identifier: 126700212

GI number: 126700212

Start: 2998152

End: 2999927

Strand: Direct

Name: fbpA [H]

Synonym: CD2592

Alternate gene names: 126700212

Gene position: 2998152-2999927 (Clockwise)

Preceding gene: 126700188

Following gene: 126700223

Centisome position: 69.88

GC content: 28.1

Gene sequence:

>1776_bases
ATGGCATTAGATGGATTAGTTATACATTCAATAGTCGATGAATTATCATCAAAACTTACAGGTGGAAAAATAGATAAGAT
ACATCAACCTGAAGATGATGAGGTAATTTTTAATATAAGAAATAATAAAGAAAATTTTAGATTGGTTTTAAGTGCAAGTG
CCTCAAATCCTAGAGTTTATCTTACAAGTAATTATCAAAAAGAAAACCCTCTAAAAGCGCCTATGTTTTGTATGTTACTT
AGAAAATACATACAAGGTGGAAATATAGTAGAAATTTCTCAAATAGGTTTTGAAAGAATAATAAAAATAAGTGTTGAATC
TTTAGATGAATTAAAAGAAAAGACAGTTAAAAATATTATGATTGAAATTATGGGAAGACATAGCAACATAATAATAACTC
ATGGTGAAGAAAATAAAATTATAGATTCTATAAAAAGAGTCCCTTTTAGCATAAGTAGAGTTCGTCAAGTTTTACCTGGT
CATGATTATTCATTGCCACCAGAACAAAACAAACTCAACCCTCTTGATGATATATCTAAGGATTTGTTTATTAAAAACCT
AGAGGAATTGGAAGGACCTATCTTTAAGTCTATATATTCTAAATTTCTAGGTATAAGCCCTATTATAGCTAAAGAAATTT
GCTACAGAGCAGGTGTAAATCAAAATGCTATCATAAAGGATATATCTGATGAACAATTTGATGCTTTACACAAAGTATTT
TGTAATTTATTCAATGATATAAATTCTAACAAATACTCTCCTTGCATTATTATAGATAAAAAGGTGGATAGGGTAGTTGA
TTTCAGTTGTATAAACCTTACATTATTTAGCGATTTATCATATATAAATAAGGATAGTATGTCTCGTATTCTGGAAGATT
TCTATAGAACTAAGGATATTAAAGATAGAATTAATCAACGTTCATCTGATTTAAAGAAGAGTATATCTGTTAAGCTTGAT
AGACTTTATAATAAACTTAAAAAACAAGAAGAAGAATTATCAGAATCCGAAAATGCAGATATTTATAAGATAAAAGGAGA
ATTGATTACTTCATATATTTATATGGTAGAAAAAGGTATGGAAAGTATTGAAGTTGCTAACTTCTATGATGAAAATTGTA
ATGATGTAATAATAGAATTAAATAAAAACTTGACACCATCTGAAAATGCTCAAAAATACTTTAAAAAGTATAACAAAATG
AAACATGCTAAAGTCGAGATATCTCATCAAATTTCCTTAAATAAGGAAGAAATAGATTACTTAGAAAACATAATTTTAAG
TATTGAAAACTGTGAAAATTTAGCTGAATTACAAGATATAAAAGAAGAACTTGCTAAAGTTGGATACATCAAGACTCAAA
AGAAAAACAGTAAAAAGGATACTATCCCATCTACAAAACCTCATGAATTTGTTTCTTCTGATGGATTTAAAATATTGGTT
GGTAAAAACAATAAGCAAAATGACTATCTTACACTAAGACTTGCTGATAATGATGACTTATGGATGCATACAAAGAATAT
TCCTGGTTCTCATGTAATAATAAAGTGTGCTGGTAAGGAAGTCCCTGATAATACTGTATTTGAAGGAGCTATGCTAGCAG
CATTCTTTAGTAAGTCAAAACTTTCTTCTCAGGTGCCTGTAGACTATACTAAGAGAAAAAATGTGAAAAAACCTAGTGGT
TCTAAACCAGGTATGGTTATTTATGAAACTAACAGTACTATTTATGTTACTCCTGAAGAAGAAACAGTAGCCAAGCTTAA
GGTTAAATCTGAATAA

Upstream 100 bases:

>100_bases
TATTAATCTCTATTGTTTAAATTCCCCCTAGTCACAAAGCGTATATTATGTGTATAATTAATTTACTGACTCATTTTGGT
CAAAGAAAGGGGTGCTATAA

Downstream 100 bases:

>100_bases
ATTCTGCACTAAATACAAAATAAATGTTAGACAACTACACATTATCATTCTAAATAAAAATAGTGGCCTTCTTATAAAGT
ACAATAATAAGGCCACTTTC

Product: fibronectin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MALDGLVIHSIVDELSSKLTGGKIDKIHQPEDDEVIFNIRNNKENFRLVLSASASNPRVYLTSNYQKENPLKAPMFCMLL
RKYIQGGNIVEISQIGFERIIKISVESLDELKEKTVKNIMIEIMGRHSNIIITHGEENKIIDSIKRVPFSISRVRQVLPG
HDYSLPPEQNKLNPLDDISKDLFIKNLEELEGPIFKSIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDALHKVF
CNLFNDINSNKYSPCIIIDKKVDRVVDFSCINLTLFSDLSYINKDSMSRILEDFYRTKDIKDRINQRSSDLKKSISVKLD
RLYNKLKKQEEELSESENADIYKIKGELITSYIYMVEKGMESIEVANFYDENCNDVIIELNKNLTPSENAQKYFKKYNKM
KHAKVEISHQISLNKEEIDYLENIILSIENCENLAELQDIKEELAKVGYIKTQKKNSKKDTIPSTKPHEFVSSDGFKILV
GKNNKQNDYLTLRLADNDDLWMHTKNIPGSHVIIKCAGKEVPDNTVFEGAMLAAFFSKSKLSSQVPVDYTKRKNVKKPSG
SKPGMVIYETNSTIYVTPEEETVAKLKVKSE

Sequences:

>Translated_591_residues
MALDGLVIHSIVDELSSKLTGGKIDKIHQPEDDEVIFNIRNNKENFRLVLSASASNPRVYLTSNYQKENPLKAPMFCMLL
RKYIQGGNIVEISQIGFERIIKISVESLDELKEKTVKNIMIEIMGRHSNIIITHGEENKIIDSIKRVPFSISRVRQVLPG
HDYSLPPEQNKLNPLDDISKDLFIKNLEELEGPIFKSIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDALHKVF
CNLFNDINSNKYSPCIIIDKKVDRVVDFSCINLTLFSDLSYINKDSMSRILEDFYRTKDIKDRINQRSSDLKKSISVKLD
RLYNKLKKQEEELSESENADIYKIKGELITSYIYMVEKGMESIEVANFYDENCNDVIIELNKNLTPSENAQKYFKKYNKM
KHAKVEISHQISLNKEEIDYLENIILSIENCENLAELQDIKEELAKVGYIKTQKKNSKKDTIPSTKPHEFVSSDGFKILV
GKNNKQNDYLTLRLADNDDLWMHTKNIPGSHVIIKCAGKEVPDNTVFEGAMLAAFFSKSKLSSQVPVDYTKRKNVKKPSG
SKPGMVIYETNSTIYVTPEEETVAKLKVKSE
>Mature_590_residues
ALDGLVIHSIVDELSSKLTGGKIDKIHQPEDDEVIFNIRNNKENFRLVLSASASNPRVYLTSNYQKENPLKAPMFCMLLR
KYIQGGNIVEISQIGFERIIKISVESLDELKEKTVKNIMIEIMGRHSNIIITHGEENKIIDSIKRVPFSISRVRQVLPGH
DYSLPPEQNKLNPLDDISKDLFIKNLEELEGPIFKSIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDALHKVFC
NLFNDINSNKYSPCIIIDKKVDRVVDFSCINLTLFSDLSYINKDSMSRILEDFYRTKDIKDRINQRSSDLKKSISVKLDR
LYNKLKKQEEELSESENADIYKIKGELITSYIYMVEKGMESIEVANFYDENCNDVIIELNKNLTPSENAQKYFKKYNKMK
HAKVEISHQISLNKEEIDYLENIILSIENCENLAELQDIKEELAKVGYIKTQKKNSKKDTIPSTKPHEFVSSDGFKILVG
KNNKQNDYLTLRLADNDDLWMHTKNIPGSHVIIKCAGKEVPDNTVFEGAMLAAFFSKSKLSSQVPVDYTKRKNVKKPSGS
KPGMVIYETNSTIYVTPEEETVAKLKVKSE

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 67641; Mature: 67510

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDGLVIHSIVDELSSKLTGGKIDKIHQPEDDEVIFNIRNNKENFRLVLSASASNPRVY
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEE
LTSNYQKENPLKAPMFCMLLRKYIQGGNIVEISQIGFERIIKISVESLDELKEKTVKNIM
EECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHH
IEIMGRHSNIIITHGEENKIIDSIKRVPFSISRVRQVLPGHDYSLPPEQNKLNPLDDISK
HHHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
DLFIKNLEELEGPIFKSIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDALHKVF
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH
CNLFNDINSNKYSPCIIIDKKVDRVVDFSCINLTLFSDLSYINKDSMSRILEDFYRTKDI
HHHHHHCCCCCCCCEEEECCCHHHHHCHHHEEEEHHHHHHHCCHHHHHHHHHHHHHCCHH
KDRINQRSSDLKKSISVKLDRLYNKLKKQEEELSESENADIYKIKGELITSYIYMVEKGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCH
ESIEVANFYDENCNDVIIELNKNLTPSENAQKYFKKYNKMKHAKVEISHQISLNKEEIDY
HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHH
LENIILSIENCENLAELQDIKEELAKVGYIKTQKKNSKKDTIPSTKPHEFVSSDGFKILV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHCCCCEEEEE
GKNNKQNDYLTLRLADNDDLWMHTKNIPGSHVIIKCAGKEVPDNTVFEGAMLAAFFSKSK
ECCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
LSSQVPVDYTKRKNVKKPSGSKPGMVIYETNSTIYVTPEEETVAKLKVKSE
CCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCEEEECCCHHCEEEEEECCC
>Mature Secondary Structure 
ALDGLVIHSIVDELSSKLTGGKIDKIHQPEDDEVIFNIRNNKENFRLVLSASASNPRVY
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEE
LTSNYQKENPLKAPMFCMLLRKYIQGGNIVEISQIGFERIIKISVESLDELKEKTVKNIM
EECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHH
IEIMGRHSNIIITHGEENKIIDSIKRVPFSISRVRQVLPGHDYSLPPEQNKLNPLDDISK
HHHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
DLFIKNLEELEGPIFKSIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDALHKVF
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH
CNLFNDINSNKYSPCIIIDKKVDRVVDFSCINLTLFSDLSYINKDSMSRILEDFYRTKDI
HHHHHHCCCCCCCCEEEECCCHHHHHCHHHEEEEHHHHHHHCCHHHHHHHHHHHHHCCHH
KDRINQRSSDLKKSISVKLDRLYNKLKKQEEELSESENADIYKIKGELITSYIYMVEKGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCH
ESIEVANFYDENCNDVIIELNKNLTPSENAQKYFKKYNKMKHAKVEISHQISLNKEEIDY
HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHH
LENIILSIENCENLAELQDIKEELAKVGYIKTQKKNSKKDTIPSTKPHEFVSSDGFKILV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHCCCCEEEEE
GKNNKQNDYLTLRLADNDDLWMHTKNIPGSHVIIKCAGKEVPDNTVFEGAMLAAFFSKSK
ECCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
LSSQVPVDYTKRKNVKKPSGSKPGMVIYETNSTIYVTPEEETVAKLKVKSE
CCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCEEEECCCHHCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]