Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is ulaA

Identifier: 126700170

GI number: 126700170

Start: 2952104

End: 2953354

Strand: Direct

Name: ulaA

Synonym: CD2553

Alternate gene names: NA

Gene position: 2952104-2953354 (Clockwise)

Preceding gene: 126700158

Following gene: 126700181

Centisome position: 68.81

GC content: 32.37

Gene sequence:

>3237_bases
ATGCTTGATTAAAAAATAGCTACGCACACTCGTGACTTTAGTCATGAGTTAGTAGCTAAAATAGTCAGCATATAGGGAAA
CCTATATGTAGAGATAGGATAGAACCTATCCAATACTACTTGAATTGCTGGAAACCCCTAAAGCTAACCAAACTAAAACA
TAAGGATGAAATAAACCTAAGTGTGAAAGTTACGAAAGTAGAAAAAATTGGTTAGATGGTATAAGGTTAAACCCTAAGTA
CTTTAAAATGGGCAATCAGCAGGTAAGCTCCGAATAGGAGAAACTTCAACGACTATTCCTCTTGAGGGAAGTACACTACA
AGCTATTGGTAGTGGAAGTGGGTAGACCTTAACGGATAATGCCGAAGGATAAGATATAGTCTGTGCTTACGTGAAAGTGT
AAGAAGTTCATAAGAGAACTGCATAGGTAGTAGCGAACTTATGTGAACGACAACCTCAAAAATGATAAAAGTTAAGAACT
TACGGTTCTTATATATGTTATTTAAAAATAAATATAAAAAACCTTCAAAATACTTGTTTTAAGTAATTGCATATTTTAAT
ATTATGATAAGTGATGAAAAATGGAAGTTACTCATGGTAGAGGATATGCATATAGTATGTCAAATATAGACATCCATTAT
TATGGGGAGACATCTTTGGAATCCTAGTTATTTCGTTGCTACTGTATCAGAAAATACAGAGGAGCAGATAAGAAAATATA
TTAATAATCAGAAAAAACAAGTAAAGTGAGGTGATAGTAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAA
ACAGCAAGAGTTAATTAACAAAACTTTTGGATGTTGTAGATTTGTATATAATAAGTATCTTGCTAAAAGAATAGAAGTTT
ATAAAAACGATAAAGAAACTTTTACTTATAAACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAAGTGGCTT
AAAGAACCTGACAAATTTTCACTACAAAACGCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGC
AGGATTTCCTAAATTTAAATCAAAGAAAATTAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATT
GTGGTCAACATATAAAACTACCTAAACTTGGTATGGTTAAGATAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAAT
GCTACTATATCTAAAGAACCAAGTGGTAGATATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGCATTTGAAAA
TACTAACAATCAGATAGGTTTAGATTTAGGAATTAAAGAATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTA
AGTATCTTAAGAAGTCATTAAGCAAACTTGCTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGA
AATAAAGCAAGATTAAAAGTTGCAAGACTTCAAGAACATATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTAC
TAAATTAATAAAAGAGAACGATATTATTTGCATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTC
GCTTAATTTCTGATGTGTCATGGTCAGAGTTTATTCGTCAATTAAAATACAAGGCTAATTGGCATGGTAGACAAATTGTA
AAGGTAGGTAAATTCTTTGCAAGTTCACAAATATGCAATAAATGTGGGTATAAAAACGAGGAAGTTAAGGACTTAAATAT
AAGAGAATGGATTTGTCCTAGTTGTAATGAAACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGAT
TAAGACTAATAACGATTCAAAATAAATAACTTATGTAAGAACCGTAGGAACTACGGGGATAGCCTGTGGAGAATTAGTAA
GACATATTTTAGTATGCAAAATTCTATGAAGCAGGAACCCTGTGACTTTAGTCATGGGAGGTTCAGTTTATTTCAAATAA
TATTTTACGTAATCCATCTATGTTAATTGGATTAATAGCAGCATTTGGTCTTGTACTACAGAAGAAGAAAGCATCTGATG
TTATAAAGGGGTCACTACTTGCAGCTTTCGGAATTATAATTATGGAGACTGGAACAGGTATGTTAGTTAGTTCAATAGCA
CCAATTAATGGAGCTTTCCAAAGTATAAGTGGTGGTGCAGTAACAAAAGGTTTAAGTGATGTTACTTTTACTGCAAGTTA
TGGTGGAATTATAGGTTTAGCAATGTTTGCGGGTTTAGCTATTCACCTAATGATAGCAAGATTTACTCCTATTAAGACAA
TCTTCTTAACAGGTCACATGCTTTATTGGTTCCCATTCATATTTGTAGCTTCAGGAGTTGAAGCTGGATTAAATGGTGGA
GTATTAATAGCTTTTGCAGCAGTATTATCAGCACTCTATTGGTCAATAATGCCTTGGTTATTAAGAAAATATGTGTTTGA
TGTTATAGGAGATGATTCTTTTACATTAGGTCATCCATCTGGTTGTTTAGCACTTATATCAGGATTTGTTGCTAAATTAG
TAGGAAATAAAGAAAAATCTACAGAAGATATAAACATACCTCAAAGTTTATCATTTTTTAGAGAAATATCTATAAGTGGT
GGAATGGCAGTGTTTTTAATGTTTATAGTTGTTGGGATAGTAATACCAGGTGCGTTTAAAGATAGTAATGAGTTTATTGG
AACGTATGCAATAAAGCAAGGTCTTTCTTTTGGAGCAGGTCTTATAATAATGCTTCATGGGGTAAGAATGCTAATAAATC
AAATAATGCCAGCATTTCAAGGTATATCTGAAAAAGTTGTGCCAAATGCACTACCTGCTTTTGACTGTCCAATATTATTT
AATTATAAACCAAATGCTGTATTAATAGGATTTTTAGTTGCTATGCTAACATCTACAGCTATGATTTTAATATGTAACTA
CTTTAATGTATTTAATTTGCTACTTATACCACTTGTTATAACTTCATTCTTTGAGTGTGGAGCAGCAGCAGTAATAGGAG
AATCACAAGGTGGTATACGTGGAGCTATAATAGGTACAGCTATAGCTGCAATATTTATGGTAGTTTTAGTAGGAATATCT
GCTGTAATTTACTCAGGAACTATTCAAAATTGGATACTAATATTTGGAGGTAATGACCTTTCATTATTTGGTATAATCAG
TAGGTTTATAGGTTCACTATTTGGAGGAATATTATAG

Upstream 100 bases:

>100_bases
AGAATAAAATAAAAACTTACTAAGTTCAAAAATAGTAAGAAAGAGAGGAGGGATTTAGTGGTAGAAAACTTAAACAGTTG
ACCTATCACTAAAAAATATA

Downstream 100 bases:

>100_bases
ATATGAAATTTAAATACATAGATGAGATAAGAAGATTAATTGATATAATAGAAAACGAAGAAAAAGTCAATATGGAAAAA
GCAGTACAAATCTTTGTTGA

Product: PTS system ascorbate-specific transporter subunit IIC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>419_residues
MLDFISNNILRNPSMLIGLIAAFGLVLQKKKASDVIKGSLLAAFGIIIMETGTGMLVSSIAPINGAFQSISGGAVTKGLS
DVTFTASYGGIIGLAMFAGLAIHLMIARFTPIKTIFLTGHMLYWFPFIFVASGVEAGLNGGVLIAFAAVLSALYWSIMPW
LLRKYVFDVIGDDSFTLGHPSGCLALISGFVAKLVGNKEKSTEDINIPQSLSFFREISISGGMAVFLMFIVVGIVIPGAF
KDSNEFIGTYAIKQGLSFGAGLIIMLHGVRMLINQIMPAFQGISEKVVPNALPAFDCPILFNYKPNAVLIGFLVAMLTST
AMILICNYFNVFNLLLIPLVITSFFECGAAAVIGESQGGIRGAIIGTAIAAIFMVVLVGISAVIYSGTIQNWILIFGGND
LSLFGIISRFIGSLFGGIL

Sequences:

>Translated_417_residues
L*YSSK**TYKPTDYTK**KVITSKY*YPILNSS*VNYSRYSY*NYHKYCSYSCTYYSSTYTTL*FSYYCCCSTLKE*SY
NKWYK*QIKYIKVVTY*NHSCRC*HSN*KSY*YSIWFIIK*YWTVKSR*CIWHNFFRYTLKCWHYLIY*HSYPMKHYYKT
CSKRKTLLYCIRSNKLITIFKRTWYYYPNNYKH*KHCHSTTYRYFSKK**TLRYVYIFCRFFFISY*FSNKS*YKC*TTR
WMT*CKRIISYNIKHIFS**PRHY*PIEC**YCCKSY*YSTI*SSFNS*SYKYEWEPIKHVTC*EDCLNRSKSCYH*VNS
*TRKHC*TYNSTITCSKSNIT*TFCYCTTTYTLESSINWCY*TN*HTCSSLHNYNSESCK**PLYNIRCFLLL*YKTKCC
Y*SN*HRWIT*NII*NK
>Mature_417_residues
L*YSSK**TYKPTDYTK**KVITSKY*YPILNSS*VNYSRYSY*NYHKYCSYSCTYYSSTYTTL*FSYYCCCSTLKE*SY
NKWYK*QIKYIKVVTY*NHSCRC*HSN*KSY*YSIWFIIK*YWTVKSR*CIWHNFFRYTLKCWHYLIY*HSYPMKHYYKT
CSKRKTLLYCIRSNKLITIFKRTWYYYPNNYKH*KHCHSTTYRYFSKK**TLRYVYIFCRFFFISY*FSNKS*YKC*TTR
WMT*CKRIISYNIKHIFS**PRHY*PIEC**YCCKSY*YSTI*SSFNS*SYKYEWEPIKHVTC*EDCLNRSKSCYH*VNS
*TRKHC*TYNSTITCSKSNIT*TFCYCTTTYTLESSINWCY*TN*HTCSSLHNYNSESCK**PLYNIRCFLLL*YKTKCC
Y*SN*HRWIT*NII*NK

Specific function: Unknown

COG id: COG3037

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44760; Mature: 44760

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LYSSKTYKPTDYTKKVITSKYYPILNSSVNYSRYSYNYHKYCSYSCTYYSSTYTTLFSYY
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHEEEEEEEEECHHHHHHHHHH
CCCSTLKESYNKWYKQIKYIKVVTYNHSCRCHSNKSYYSIWFIIKYWTVKSRCIWHNFFR
HHHHHHHHHHHHHHHHEEEEEEEEECCCEEECCCCCEEEEEEEEEEEEHHHHHHHHHHHH
YTLKCWHYLIYHSYPMKHYYKTCSKRKTLLYCIRSNKLITIFKRTWYYYPNNYKHKHCHS
HHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCH
TTYRYFSKKTLRYVYIFCRFFFISYFSNKSYKCTTRWMTCKRIISYNIKHIFSPRHYPIE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHCCCCCCCEE
CYCCKSYYSTISSFNSSYKYEWEPIKHVTCEDCLNRSKSCYHVNSTRKHCTYNSTITCSK
EEEHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCEEEECCCCCCEEECCEEEEEC
SNITTFCYCTTTYTLESSINWCYTNHTCSSLHNYNSESCKPLYNIRCFLLLYKTKCCYSN
CCCEEEEEEEEEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHHHEEEEEEEEHHHHCCC
HRWITNIINK
CCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA