| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ulaA
Identifier: 126700170
GI number: 126700170
Start: 2952104
End: 2953354
Strand: Direct
Name: ulaA
Synonym: CD2553
Alternate gene names: NA
Gene position: 2952104-2953354 (Clockwise)
Preceding gene: 126700158
Following gene: 126700181
Centisome position: 68.81
GC content: 32.37
Gene sequence:
>3237_bases ATGCTTGATTAAAAAATAGCTACGCACACTCGTGACTTTAGTCATGAGTTAGTAGCTAAAATAGTCAGCATATAGGGAAA CCTATATGTAGAGATAGGATAGAACCTATCCAATACTACTTGAATTGCTGGAAACCCCTAAAGCTAACCAAACTAAAACA TAAGGATGAAATAAACCTAAGTGTGAAAGTTACGAAAGTAGAAAAAATTGGTTAGATGGTATAAGGTTAAACCCTAAGTA CTTTAAAATGGGCAATCAGCAGGTAAGCTCCGAATAGGAGAAACTTCAACGACTATTCCTCTTGAGGGAAGTACACTACA AGCTATTGGTAGTGGAAGTGGGTAGACCTTAACGGATAATGCCGAAGGATAAGATATAGTCTGTGCTTACGTGAAAGTGT AAGAAGTTCATAAGAGAACTGCATAGGTAGTAGCGAACTTATGTGAACGACAACCTCAAAAATGATAAAAGTTAAGAACT TACGGTTCTTATATATGTTATTTAAAAATAAATATAAAAAACCTTCAAAATACTTGTTTTAAGTAATTGCATATTTTAAT ATTATGATAAGTGATGAAAAATGGAAGTTACTCATGGTAGAGGATATGCATATAGTATGTCAAATATAGACATCCATTAT TATGGGGAGACATCTTTGGAATCCTAGTTATTTCGTTGCTACTGTATCAGAAAATACAGAGGAGCAGATAAGAAAATATA TTAATAATCAGAAAAAACAAGTAAAGTGAGGTGATAGTAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAA ACAGCAAGAGTTAATTAACAAAACTTTTGGATGTTGTAGATTTGTATATAATAAGTATCTTGCTAAAAGAATAGAAGTTT ATAAAAACGATAAAGAAACTTTTACTTATAAACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAAGTGGCTT AAAGAACCTGACAAATTTTCACTACAAAACGCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAAGC AGGATTTCCTAAATTTAAATCAAAGAAAATTAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATT GTGGTCAACATATAAAACTACCTAAACTTGGTATGGTTAAGATAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAAT GCTACTATATCTAAAGAACCAAGTGGTAGATATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGCATTTGAAAA TACTAACAATCAGATAGGTTTAGATTTAGGAATTAAAGAATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTA AGTATCTTAAGAAGTCATTAAGCAAACTTGCTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGA AATAAAGCAAGATTAAAAGTTGCAAGACTTCAAGAACATATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTAC TAAATTAATAAAAGAGAACGATATTATTTGCATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTC GCTTAATTTCTGATGTGTCATGGTCAGAGTTTATTCGTCAATTAAAATACAAGGCTAATTGGCATGGTAGACAAATTGTA AAGGTAGGTAAATTCTTTGCAAGTTCACAAATATGCAATAAATGTGGGTATAAAAACGAGGAAGTTAAGGACTTAAATAT AAGAGAATGGATTTGTCCTAGTTGTAATGAAACTCACGATAGAGATATAAATGCAAGTATAAATATATTAAAAGAAGGAT TAAGACTAATAACGATTCAAAATAAATAACTTATGTAAGAACCGTAGGAACTACGGGGATAGCCTGTGGAGAATTAGTAA GACATATTTTAGTATGCAAAATTCTATGAAGCAGGAACCCTGTGACTTTAGTCATGGGAGGTTCAGTTTATTTCAAATAA TATTTTACGTAATCCATCTATGTTAATTGGATTAATAGCAGCATTTGGTCTTGTACTACAGAAGAAGAAAGCATCTGATG TTATAAAGGGGTCACTACTTGCAGCTTTCGGAATTATAATTATGGAGACTGGAACAGGTATGTTAGTTAGTTCAATAGCA CCAATTAATGGAGCTTTCCAAAGTATAAGTGGTGGTGCAGTAACAAAAGGTTTAAGTGATGTTACTTTTACTGCAAGTTA TGGTGGAATTATAGGTTTAGCAATGTTTGCGGGTTTAGCTATTCACCTAATGATAGCAAGATTTACTCCTATTAAGACAA TCTTCTTAACAGGTCACATGCTTTATTGGTTCCCATTCATATTTGTAGCTTCAGGAGTTGAAGCTGGATTAAATGGTGGA GTATTAATAGCTTTTGCAGCAGTATTATCAGCACTCTATTGGTCAATAATGCCTTGGTTATTAAGAAAATATGTGTTTGA TGTTATAGGAGATGATTCTTTTACATTAGGTCATCCATCTGGTTGTTTAGCACTTATATCAGGATTTGTTGCTAAATTAG TAGGAAATAAAGAAAAATCTACAGAAGATATAAACATACCTCAAAGTTTATCATTTTTTAGAGAAATATCTATAAGTGGT GGAATGGCAGTGTTTTTAATGTTTATAGTTGTTGGGATAGTAATACCAGGTGCGTTTAAAGATAGTAATGAGTTTATTGG AACGTATGCAATAAAGCAAGGTCTTTCTTTTGGAGCAGGTCTTATAATAATGCTTCATGGGGTAAGAATGCTAATAAATC AAATAATGCCAGCATTTCAAGGTATATCTGAAAAAGTTGTGCCAAATGCACTACCTGCTTTTGACTGTCCAATATTATTT AATTATAAACCAAATGCTGTATTAATAGGATTTTTAGTTGCTATGCTAACATCTACAGCTATGATTTTAATATGTAACTA CTTTAATGTATTTAATTTGCTACTTATACCACTTGTTATAACTTCATTCTTTGAGTGTGGAGCAGCAGCAGTAATAGGAG AATCACAAGGTGGTATACGTGGAGCTATAATAGGTACAGCTATAGCTGCAATATTTATGGTAGTTTTAGTAGGAATATCT GCTGTAATTTACTCAGGAACTATTCAAAATTGGATACTAATATTTGGAGGTAATGACCTTTCATTATTTGGTATAATCAG TAGGTTTATAGGTTCACTATTTGGAGGAATATTATAG
Upstream 100 bases:
>100_bases AGAATAAAATAAAAACTTACTAAGTTCAAAAATAGTAAGAAAGAGAGGAGGGATTTAGTGGTAGAAAACTTAAACAGTTG ACCTATCACTAAAAAATATA
Downstream 100 bases:
>100_bases ATATGAAATTTAAATACATAGATGAGATAAGAAGATTAATTGATATAATAGAAAACGAAGAAAAAGTCAATATGGAAAAA GCAGTACAAATCTTTGTTGA
Product: PTS system ascorbate-specific transporter subunit IIC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>419_residues MLDFISNNILRNPSMLIGLIAAFGLVLQKKKASDVIKGSLLAAFGIIIMETGTGMLVSSIAPINGAFQSISGGAVTKGLS DVTFTASYGGIIGLAMFAGLAIHLMIARFTPIKTIFLTGHMLYWFPFIFVASGVEAGLNGGVLIAFAAVLSALYWSIMPW LLRKYVFDVIGDDSFTLGHPSGCLALISGFVAKLVGNKEKSTEDINIPQSLSFFREISISGGMAVFLMFIVVGIVIPGAF KDSNEFIGTYAIKQGLSFGAGLIIMLHGVRMLINQIMPAFQGISEKVVPNALPAFDCPILFNYKPNAVLIGFLVAMLTST AMILICNYFNVFNLLLIPLVITSFFECGAAAVIGESQGGIRGAIIGTAIAAIFMVVLVGISAVIYSGTIQNWILIFGGND LSLFGIISRFIGSLFGGIL
Sequences:
>Translated_417_residues L*YSSK**TYKPTDYTK**KVITSKY*YPILNSS*VNYSRYSY*NYHKYCSYSCTYYSSTYTTL*FSYYCCCSTLKE*SY NKWYK*QIKYIKVVTY*NHSCRC*HSN*KSY*YSIWFIIK*YWTVKSR*CIWHNFFRYTLKCWHYLIY*HSYPMKHYYKT CSKRKTLLYCIRSNKLITIFKRTWYYYPNNYKH*KHCHSTTYRYFSKK**TLRYVYIFCRFFFISY*FSNKS*YKC*TTR WMT*CKRIISYNIKHIFS**PRHY*PIEC**YCCKSY*YSTI*SSFNS*SYKYEWEPIKHVTC*EDCLNRSKSCYH*VNS *TRKHC*TYNSTITCSKSNIT*TFCYCTTTYTLESSINWCY*TN*HTCSSLHNYNSESCK**PLYNIRCFLLL*YKTKCC Y*SN*HRWIT*NII*NK >Mature_417_residues L*YSSK**TYKPTDYTK**KVITSKY*YPILNSS*VNYSRYSY*NYHKYCSYSCTYYSSTYTTL*FSYYCCCSTLKE*SY NKWYK*QIKYIKVVTY*NHSCRC*HSN*KSY*YSIWFIIK*YWTVKSR*CIWHNFFRYTLKCWHYLIY*HSYPMKHYYKT CSKRKTLLYCIRSNKLITIFKRTWYYYPNNYKH*KHCHSTTYRYFSKK**TLRYVYIFCRFFFISY*FSNKS*YKC*TTR WMT*CKRIISYNIKHIFS**PRHY*PIEC**YCCKSY*YSTI*SSFNS*SYKYEWEPIKHVTC*EDCLNRSKSCYH*VNS *TRKHC*TYNSTITCSKSNIT*TFCYCTTTYTLESSINWCY*TN*HTCSSLHNYNSESCK**PLYNIRCFLLL*YKTKCC Y*SN*HRWIT*NII*NK
Specific function: Unknown
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44760; Mature: 44760
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LYSSKTYKPTDYTKKVITSKYYPILNSSVNYSRYSYNYHKYCSYSCTYYSSTYTTLFSYY CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHEEEEEEEEECHHHHHHHHHH CCCSTLKESYNKWYKQIKYIKVVTYNHSCRCHSNKSYYSIWFIIKYWTVKSRCIWHNFFR HHHHHHHHHHHHHHHHEEEEEEEEECCCEEECCCCCEEEEEEEEEEEEHHHHHHHHHHHH YTLKCWHYLIYHSYPMKHYYKTCSKRKTLLYCIRSNKLITIFKRTWYYYPNNYKHKHCHS HHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCH TTYRYFSKKTLRYVYIFCRFFFISYFSNKSYKCTTRWMTCKRIISYNIKHIFSPRHYPIE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHCCCCCCCEE CYCCKSYYSTISSFNSSYKYEWEPIKHVTCEDCLNRSKSCYHVNSTRKHCTYNSTITCSK EEEHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHCCCCCEEEECCCCCCEEECCEEEEEC SNITTFCYCTTTYTLESSINWCYTNHTCSSLHNYNSESCKPLYNIRCFLLLYKTKCCYSN CCCEEEEEEEEEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHHHEEEEEEEEHHHHCCC HRWITNIINK CCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA