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The map label for this gene is rpmB

Identifier: 126700181

GI number: 126700181

Start: 2964187

End: 2964375

Strand: Direct

Name: rpmB

Synonym: CD2562A

Alternate gene names: 126700181

Gene position: 2964187-2964375 (Clockwise)

Preceding gene: 126700170

Following gene: 126700183

Centisome position: 69.09

GC content: 35.45

Gene sequence:

>189_bases
ATGGCAAAAGTATGTAGCGTATGTGGTAAAGGTAAGGTTTCTGGAAACCAAGTATCACACTCAAATAAACATAATAAAAG
AACATGGTCAGCTAACTTAAGAAGCGTAAGAGCGATTATAGATGGAGCTCCTAAGAGAGTAAAAGTTTGTACTAGATGTT
TACGTTCTGGTAAAATTGAAAGAGCTTAG

Upstream 100 bases:

>100_bases
AAGGCAAATATATATTTCTATTGCAAATTTTTGTTATTTATGATAATATAAATATGTTTTTAGTCTTTAAATAGTTATCA
TTTTAAGGAGGTGTGCGTAG

Downstream 100 bases:

>100_bases
TAACCACGTTTAAAAGCCTACTTCCGTAAGTAGGCTTTTTAATTTAATCATTTTTACTCTTTCTCATAAATTTTAGGATT
ATACTTGAAATCCATTTTGG

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MAKVCSVCGKGKVSGNQVSHSNKHNKRTWSANLRSVRAIIDGAPKRVKVCTRCLRSGKIERA

Sequences:

>Translated_62_residues
MAKVCSVCGKGKVSGNQVSHSNKHNKRTWSANLRSVRAIIDGAPKRVKVCTRCLRSGKIERA
>Mature_61_residues
AKVCSVCGKGKVSGNQVSHSNKHNKRTWSANLRSVRAIIDGAPKRVKVCTRCLRSGKIERA

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_CLOD6 (Q182Q0)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001089078.1
- ProteinModelPortal:   Q182Q0
- SMR:   Q182Q0
- STRING:   Q182Q0
- GeneID:   4914236
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD2562A
- NMPDR:   fig|1496.1.peg.2137
- eggNOG:   COG0227
- HOGENOM:   HBG597003
- OMA:   NACTSCI
- ProtClustDB:   PRK00359
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 6779; Mature: 6648

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVCSVCGKGKVSGNQVSHSNKHNKRTWSANLRSVRAIIDGAPKRVKVCTRCLRSGKIE
CCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
RA
CC
>Mature Secondary Structure 
AKVCSVCGKGKVSGNQVSHSNKHNKRTWSANLRSVRAIIDGAPKRVKVCTRCLRSGKIE
CCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA