Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is recX

Identifier: 126700142

GI number: 126700142

Start: 2918012

End: 2918650

Strand: Direct

Name: recX

Synonym: CD2525

Alternate gene names: 126700142

Gene position: 2918012-2918650 (Clockwise)

Preceding gene: 126700136

Following gene: 126700143

Centisome position: 68.01

GC content: 22.54

Gene sequence:

>639_bases
ATGGGTATAATTACAAAAATAGAACAACAAAAAAGAAATGATGATAGAGTTAATATTTATGTAGATGATAAATTTTTTAT
TGCTATATTTAAAGAACTTGTTTATACATTTAATTTAAAAAAAGGGAATGAAATAAATGAAGAAGAATTAAAACCTATTT
TAGATGATGAAATGTATATAAAAGCTAAAAATAAAGCATTAAATATTTTATCTCATGCTGACCAATCTGAAAAAAAATTA
AAAGAAAAACTATCATCAGAATTTGATGAAAATATAATTGAGAGGGTCATAGATTTTCTTAAAAGTTATAATCTCGTAAA
TGACAGTGTATTAGCTCAAAAAATTGTTAACACAAATGTTAACCTAAATAAATGTGGCAAAAACAGAATTAAGCAGAATT
TATATAATAAAGGTATCAATAGAAGTACAATCAATGAAGCAGTATCTGAATTAGACAAGGACACTGAATTTGAAAATGCT
ATGTATCTAGCAAAAAAAAGGTATGAAAGAGTAAAGAAAGAAGATAAAAAGAAAATATATCAAAAAATTTCTCAACATCT
TTCCTATAAAGGCTTTGATTATGATATTATTAAAAGAGTTTTAAACAAACTTTTAAATTTTGATGAATACGATATATAA

Upstream 100 bases:

>100_bases
TGTCTTAATTTTGATAAAATATAACATACAAATATAAGTTTTTTGTTAAATTTTATTAGTTGCTTTTGTTAATATAATTA
CATATAAAAAAGGAGGACTT

Downstream 100 bases:

>100_bases
GTATAAATACTAGGGAGGTAAATTATGAAATTAATCATTGGTGGCTTAAGCTTTTTATTAGGATTATATAATATATATCA
ATTATACAGAGAAGATAGTA

Product: recombination regulator RecX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYIKAKNKALNILSHADQSEKKL
KEKLSSEFDENIIERVIDFLKSYNLVNDSVLAQKIVNTNVNLNKCGKNRIKQNLYNKGINRSTINEAVSELDKDTEFENA
MYLAKKRYERVKKEDKKKIYQKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI

Sequences:

>Translated_212_residues
MGIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYIKAKNKALNILSHADQSEKKL
KEKLSSEFDENIIERVIDFLKSYNLVNDSVLAQKIVNTNVNLNKCGKNRIKQNLYNKGINRSTINEAVSELDKDTEFENA
MYLAKKRYERVKKEDKKKIYQKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI
>Mature_211_residues
GIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYIKAKNKALNILSHADQSEKKLK
EKLSSEFDENIIERVIDFLKSYNLVNDSVLAQKIVNTNVNLNKCGKNRIKQNLYNKGINRSTINEAVSELDKDTEFENAM
YLAKKRYERVKKEDKKKIYQKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI

Specific function: Modulates recA activity

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECX_CLOD6 (Q182L1)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001089039.1
- ProteinModelPortal:   Q182L1
- SMR:   Q182L1
- STRING:   Q182L1
- GeneID:   4915283
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD2525
- NMPDR:   fig|1496.1.peg.2099
- eggNOG:   COG2137
- HOGENOM:   HBG417507
- OMA:   ERYNIFI
- ProtClustDB:   PRK00117
- GO:   GO:0005737
- HAMAP:   MF_01114
- InterPro:   IPR003783

Pfam domain/function: PF02631 RecX

EC number: NA

Molecular weight: Translated: 25134; Mature: 25003

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYI
CCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHE
KAKNKALNILSHADQSEKKLKEKLSSEFDENIIERVIDFLKSYNLVNDSVLAQKIVNTNV
EHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
NLNKCGKNRIKQNLYNKGINRSTINEAVSELDKDTEFENAMYLAKKRYERVKKEDKKKIY
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GIITKIEQQKRNDDRVNIYVDDKFFIAIFKELVYTFNLKKGNEINEEELKPILDDEMYI
CCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHE
KAKNKALNILSHADQSEKKLKEKLSSEFDENIIERVIDFLKSYNLVNDSVLAQKIVNTNV
EHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
NLNKCGKNRIKQNLYNKGINRSTINEAVSELDKDTEFENAMYLAKKRYERVKKEDKKKIY
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKISQHLSYKGFDYDIIKRVLNKLLNFDEYDI
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA