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The map label for this gene is gbeA [H]

Identifier: 126700143

GI number: 126700143

Start: 2918803

End: 2920806

Strand: Direct

Name: gbeA [H]

Synonym: CD2526

Alternate gene names: 126700143

Gene position: 2918803-2920806 (Clockwise)

Preceding gene: 126700142

Following gene: 126700144

Centisome position: 68.03

GC content: 30.44

Gene sequence:

>2004_bases
ATGAAAAGTGAAAAAAGATTTAAAATTTTAGATATTGATGTATACCTACAACCATTTGAATCTGATATAAAAAAGCGAAT
GAAACATTATGAGGATATGAAATCAAAAACATTGAAAAACTATAAAGATTTTAGTTCTTTTGCAAATGCTCATCTTTACT
ATGGATTTCATCAGACAAATGATGGATTCTTCTATAGGGAATGGGCTCCAAATGCAGATAGTTTGTCACTAATTGGTGAC
TTTAATAATTGGAATAGAAAATCTCATCCTCTAAGAAAAATTGGGTCTGGTAATTGGGAAATATTTATTCCTGGTCAAAA
TAGCTTACCTCACAAATCAGAGATAAAGGTACAAGTTACTGCAAATGGAAAAACATTTGACCGTATACCATTATATATAA
AAAGAGTAATTCAAAAAGATTTTGGTGGATTTAATGGACAAATATGGCAACCAAAAACTCCATTTATCTGGACTGACAAT
AATTTTGACTTAAAAAACATAACTTCTCCACTAATCTATGAATGTCATATAGGTATGTCTACTGAAAGCGAATCTATTGG
AACTTATAATGAATTTACTGAAAAAATACTTCCTAAGATAAAAAAAGCTGGATACAATACCATTCAGCTTATGGCTATTA
TGGAACATCCATATTATGCATCTTTTGGATACCAAGTTTCAAACTTTTATGCAATCTCATCTAGGTTTGGTACTCCTGAA
GACTTAAAAAACCTCATAAACACTGCTCATTCAATGGGGATTGCTGTTTTATTAGACTTAGTTCATTCTCATGCTGTAAA
GAATACTTTAGAAGGAATAAATGAGTTTGATGGAAGTGAACATCAATTTTTCCACTCAGGTTCAAAGGGAAATCATCCTG
CTTGGGGTACAAAACTTTTTAACTATGGTAAACCTGAAGTAATACATTTTTTGCTTTCAAATATAAAATTTTGGTTAAAT
GAGTACCATTTTGATGGCTTTAGGTTTGATGGTGTAACTTCAATGTTATATCATAACCATGGTCTTGGAGTTTCATTTGA
TAGTTATGAAAAATATTTTAGTATGAATACAGATATTGAAGCTATAACATATCTCCAATTTGCAAATGAATTAATAAAAG
AAATTAAACCTAATTCGATAAGTATTGCAGAAGATATGAGTGGAATGCCTGGTATGTGTATCCCTATAAAAGACGGCGGA
ATTGGATTTGACTATAGACTCGCAATGGGAGTACCTGATTTTTGGATAAAAACTATCTCTAACTTATCTGATGAAGACTG
GGATTTGGGAAAAATGTGGTATGAACTTACTACTAGACGACCTGGAGAAAAAAATATAGGATATTGTGAATCCCATGACC
AAGCATTAGTTGGCGATAAAACAATTATTTTTTGGCTAGCTGACAAGGAAATGTACTGGAATATGGAAATAAACTCAAAT
AACCATGTTATCAATAGAGCAATATCTCTTATTAAATTAATTAAATTAATAACTTTTTCTCTAGCAGGTGAAGGATATCT
AAATTTTATGGGAAATGAATTTGGACATCCTGAGTGGATTGATTTTCCACGAGAAGGCAACAATTGGAGCTATAAGTATG
CCAGAAGACAATGGAGCCTTTCAGAAGATAACAACTTAAAGTATAAACAATTATTAAATTTTGATAAATCTATGCTCGAA
CTTACAAAATACAGTGATATTTTTATCCAAAATAGTCATGAACTTATACATATGGATAATGATAAAAAGATTTTGGTGTA
CAGTAAGGGCAAATATTTATTTATATTTAATTTCCACCCTAATCTAATACAATCAGTTGATATTTCAAAGTTTCAAAATA
CAAACTACAAAACGATATTAAATACTGATATGGTAGAGTTTGGAGGAAACACAAAAAAAGAAAACTTAAGAGATTATGAT
GTATACTTTAGCTCAACTCCTCCTTCTTCTAAAATGCCTATTGCCTCTCGTACAGCAATAGTGCTTTTAGATAATGGTAT
TTAA

Upstream 100 bases:

>100_bases
TTTTATTAGGATTATATAATATATATCAATTATACAGAGAAGATAGTATGAGATAAATATTATTTTTTAGATGTAATATT
TATTATGGAGGAGAAATACA

Downstream 100 bases:

>100_bases
ATATGAGCCAAATATATTAGGAAACTGCAAATATAGTCCAGTATAAGGCAAAAAAATAAAATAATGAAAGCATGGCAATA
TACCTGTTCAACATGCTAAA

Product: glycogen branching protein

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MKSEKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTNDGFFYREWAPNADSLSLIGD
FNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEIKVQVTANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDN
NFDLKNITSPLIYECHIGMSTESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPE
DLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLFNYGKPEVIHFLLSNIKFWLN
EYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIEAITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGG
IGFDYRLAMGVPDFWIKTISNLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSN
NHVINRAISLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSLSEDNNLKYKQLLNFDKSMLE
LTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHPNLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYD
VYFSSTPPSSKMPIASRTAIVLLDNGI

Sequences:

>Translated_667_residues
MKSEKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTNDGFFYREWAPNADSLSLIGD
FNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEIKVQVTANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDN
NFDLKNITSPLIYECHIGMSTESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPE
DLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLFNYGKPEVIHFLLSNIKFWLN
EYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIEAITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGG
IGFDYRLAMGVPDFWIKTISNLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSN
NHVINRAISLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSLSEDNNLKYKQLLNFDKSMLE
LTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHPNLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYD
VYFSSTPPSSKMPIASRTAIVLLDNGI
>Mature_667_residues
MKSEKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTNDGFFYREWAPNADSLSLIGD
FNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEIKVQVTANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDN
NFDLKNITSPLIYECHIGMSTESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPE
DLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLFNYGKPEVIHFLLSNIKFWLN
EYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIEAITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGG
IGFDYRLAMGVPDFWIKTISNLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSN
NHVINRAISLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSLSEDNNLKYKQLLNFDKSMLE
LTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHPNLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYD
VYFSSTPPSSKMPIASRTAIVLLDNGI

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=671, Percent_Identity=46.4977645305514, Blast_Score=610, Evalue=1e-174,
Organism=Escherichia coli, GI1789839, Length=602, Percent_Identity=27.0764119601329, Blast_Score=186, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17554896, Length=671, Percent_Identity=43.8152011922504, Blast_Score=553, Evalue=1e-157,
Organism=Caenorhabditis elegans, GI32564391, Length=596, Percent_Identity=45.3020134228188, Blast_Score=514, Evalue=1e-146,
Organism=Saccharomyces cerevisiae, GI6320826, Length=691, Percent_Identity=46.8885672937771, Blast_Score=582, Evalue=1e-167,
Organism=Drosophila melanogaster, GI28573410, Length=639, Percent_Identity=46.3223787167449, Blast_Score=597, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 77377; Mature: 77377

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTN
CCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
DGFFYREWAPNADSLSLIGDFNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEIKVQVT
CCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEE
ANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDNNFDLKNITSPLIYECHIGMS
ECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHCCCCEEEEEECCCC
TESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPE
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCHH
DLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHH
NYGKPEVIHFLLSNIKFWLNEYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIE
CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHEEHEECCCCCCCCHHHHHHCCCCCCHH
AITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGGIGFDYRLAMGVPDFWIKTIS
HHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHH
NLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSN
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCEEEEEEEECCC
NHVINRAISLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSL
CHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCEEEHHEECCC
SEDNNLKYKQLLNFDKSMLELTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHP
CCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCEEEEEECCCEEEEEECCC
NLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYDVYFSSTPPSSKMPIASRTAI
HHHHHCCHHHHCCCCCEEEEECCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE
VLLDNGI
EEEECCC
>Mature Secondary Structure
MKSEKRFKILDIDVYLQPFESDIKKRMKHYEDMKSKTLKNYKDFSSFANAHLYYGFHQTN
CCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
DGFFYREWAPNADSLSLIGDFNNWNRKSHPLRKIGSGNWEIFIPGQNSLPHKSEIKVQVT
CCEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEE
ANGKTFDRIPLYIKRVIQKDFGGFNGQIWQPKTPFIWTDNNFDLKNITSPLIYECHIGMS
ECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCHHHCCCCEEEEEECCCC
TESESIGTYNEFTEKILPKIKKAGYNTIQLMAIMEHPYYASFGYQVSNFYAISSRFGTPE
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCEEEEEEEEECCCCCHH
DLKNLINTAHSMGIAVLLDLVHSHAVKNTLEGINEFDGSEHQFFHSGSKGNHPAWGTKLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHH
NYGKPEVIHFLLSNIKFWLNEYHFDGFRFDGVTSMLYHNHGLGVSFDSYEKYFSMNTDIE
CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHEEHEECCCCCCCCHHHHHHCCCCCCHH
AITYLQFANELIKEIKPNSISIAEDMSGMPGMCIPIKDGGIGFDYRLAMGVPDFWIKTIS
HHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHH
NLSDEDWDLGKMWYELTTRRPGEKNIGYCESHDQALVGDKTIIFWLADKEMYWNMEINSN
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCEEEEEEEECCC
NHVINRAISLIKLIKLITFSLAGEGYLNFMGNEFGHPEWIDFPREGNNWSYKYARRQWSL
CHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCEEEHHEECCC
SEDNNLKYKQLLNFDKSMLELTKYSDIFIQNSHELIHMDNDKKILVYSKGKYLFIFNFHP
CCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCEEEEEECCCEEEEEECCC
NLIQSVDISKFQNTNYKTILNTDMVEFGGNTKKENLRDYDVYFSSTPPSSKMPIASRTAI
HHHHHCCHHHHCCCCCEEEEECCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEE
VLLDNGI
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]