Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is cotJB2 [H]

Identifier: 126700015

GI number: 126700015

Start: 2768726

End: 2768992

Strand: Direct

Name: cotJB2 [H]

Synonym: CD2400

Alternate gene names: 126700015

Gene position: 2768726-2768992 (Clockwise)

Preceding gene: 126700014

Following gene: 126700016

Centisome position: 64.54

GC content: 35.58

Gene sequence:

>267_bases
ATGAAAGACTCATCTAGAGCTGAACTTATGAGAAAAGTTCAGGAAACATCTTTTGCATGTGTTGATATGAACTTATATTT
AGACAATCACCCTGATGATAAAAATGCTATCAACACTTATAATTCATTATGTAATCAATTTGCGCAAGCTAGATATGCTT
ACGAAAATAAATACGGTCCTTTAACTAACTTTGGGTATGCTCCAAGTAGATGCCCTTGGCAATGGGCTGACCAACCTTGG
CCTTGGGACAGAGAATTTAATTATTAG

Upstream 100 bases:

>100_bases
AATTTGGAACTATATTTCCAGAACTAAACTTACTAGAGTCTGAAATGTACAACAAAGAATTATATGCTAAGCCAAAAAAA
TATAGAGGAGGTAGAAGATA

Downstream 100 bases:

>100_bases
ACATCAAGTATTGGAGGATTGAAAATTCATGTGGATATATCAGAAAACTATACAACACCCAGTTAATATAAAAACTTGTG
ACCCTAGAATGGCTAAATTT

Product: spore-coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKDSSRAELMRKVQETSFACVDMNLYLDNHPDDKNAINTYNSLCNQFAQARYAYENKYGPLTNFGYAPSRCPWQWADQPW
PWDREFNY

Sequences:

>Translated_88_residues
MKDSSRAELMRKVQETSFACVDMNLYLDNHPDDKNAINTYNSLCNQFAQARYAYENKYGPLTNFGYAPSRCPWQWADQPW
PWDREFNY
>Mature_88_residues
MKDSSRAELMRKVQETSFACVDMNLYLDNHPDDKNAINTYNSLCNQFAQARYAYENKYGPLTNFGYAPSRCPWQWADQPW
PWDREFNY

Specific function: The cotJ operon proteins affect spore coat composition. They are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016571 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10499; Mature: 10499

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSSRAELMRKVQETSFACVDMNLYLDNHPDDKNAINTYNSLCNQFAQARYAYENKYGP
CCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LTNFGYAPSRCPWQWADQPWPWDREFNY
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDSSRAELMRKVQETSFACVDMNLYLDNHPDDKNAINTYNSLCNQFAQARYAYENKYGP
CCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LTNFGYAPSRCPWQWADQPWPWDREFNY
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768848; 9384377 [H]