Click here to switch to the map view.

The map label for this gene is cotJC2 [H]

Identifier: 126700016

GI number: 126700016

Start: 2769021

End: 2769593

Strand: Direct

Name: cotJC2 [H]

Synonym: CD2401

Alternate gene names: 126700016

Gene position: 2769021-2769593 (Clockwise)

Preceding gene: 126700015

Following gene: 126700019

Centisome position: 64.54

GC content: 34.55

Gene sequence:

>573_bases
ATGTGGATATATCAGAAAACTATACAACACCCAGTTAATATAAAAACTTGTGACCCTAGAATGGCTAAATTTCTTATAAC
TCAATTTGGTGGGCCAAATGGGGAACTTGCTGCATCTTTAAGATATTTAAGCCAAAGATATACAATGCCTACTGGTAATA
TGCGTGCACTTTTAACAGATATTGGTACAGAAGAACTAGCTCACGTTGAGCTTATATGTACTATGGTTTATCAGTTAACT
TCTGATGCAAGCCCAGAAGAGTTAAAAGCTGCAGGTCTTGGTTCAAACTATGCTCAAAATGGATATGGAATTTATCCAAC
AGATTCAAATGGTGTTCCATTTGATGTAAGACCTATAGCAGTTATGTCAAATCCCGTAACCGATTTACATGAGGATATGG
CAGCTGAACAAAAAGCACTTGCAACTTATTATCAACTTATAAACCTAACAGATGACGTTGATGTTATAGATGTATTAAAA
TTCTTGGGTCAAAGAGAAATAATTCACTATCAAAGATTTGGTGAAGCTTTAATGGATGCTTACGAGTTAGAAGAATCTCA
AAAAATGTTCTAA

Upstream 100 bases:

>100_bases
TATGCTCCAAGTAGATGCCCTTGGCAATGGGCTGACCAACCTTGGCCTTGGGACAGAGAATTTAATTATTAGACATCAAG
TATTGGAGGATTGAAAATTC

Downstream 100 bases:

>100_bases
AATTTTTATTTGTATAACTATTATTATTTGATAATTTATAATTTACTGTTGTGTTAAAATTTATAAAAAATATAAATATA
ATTTATTTTCTATAAACAGA

Product: spore-coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MWIYQKTIQHPVNIKTCDPRMAKFLITQFGGPNGELAASLRYLSQRYTMPTGNMRALLTDIGTEELAHVELICTMVYQLT
SDASPEELKAAGLGSNYAQNGYGIYPTDSNGVPFDVRPIAVMSNPVTDLHEDMAAEQKALATYYQLINLTDDVDVIDVLK
FLGQREIIHYQRFGEALMDAYELEESQKMF

Sequences:

>Translated_190_residues
MWIYQKTIQHPVNIKTCDPRMAKFLITQFGGPNGELAASLRYLSQRYTMPTGNMRALLTDIGTEELAHVELICTMVYQLT
SDASPEELKAAGLGSNYAQNGYGIYPTDSNGVPFDVRPIAVMSNPVTDLHEDMAAEQKALATYYQLINLTDDVDVIDVLK
FLGQREIIHYQRFGEALMDAYELEESQKMF
>Mature_190_residues
MWIYQKTIQHPVNIKTCDPRMAKFLITQFGGPNGELAASLRYLSQRYTMPTGNMRALLTDIGTEELAHVELICTMVYQLT
SDASPEELKAAGLGSNYAQNGYGIYPTDSNGVPFDVRPIAVMSNPVTDLHEDMAAEQKALATYYQLINLTDDVDVIDVLK
FLGQREIIHYQRFGEALMDAYELEESQKMF

Specific function: The cotJ operon proteins affect spore coat composition. They are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat [H]

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: NA

Molecular weight: Translated: 21397; Mature: 21397

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIYQKTIQHPVNIKTCDPRMAKFLITQFGGPNGELAASLRYLSQRYTMPTGNMRALLTD
CCCCHHHHCCCCCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
IGTEELAHVELICTMVYQLTSDASPEELKAAGLGSNYAQNGYGIYPTDSNGVPFDVRPIA
HCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHH
VMSNPVTDLHEDMAAEQKALATYYQLINLTDDVDVIDVLKFLGQREIIHYQRFGEALMDA
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
YELEESQKMF
HHHHHHHCCC
>Mature Secondary Structure
MWIYQKTIQHPVNIKTCDPRMAKFLITQFGGPNGELAASLRYLSQRYTMPTGNMRALLTD
CCCCHHHHCCCCCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
IGTEELAHVELICTMVYQLTSDASPEELKAAGLGSNYAQNGYGIYPTDSNGVPFDVRPIA
HCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHH
VMSNPVTDLHEDMAAEQKALATYYQLINLTDDVDVIDVLKFLGQREIIHYQRFGEALMDA
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
YELEESQKMF
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768848; 9384377 [H]