| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699933
Identifier: 126699933
GI number: 126699933
Start: 2676529
End: 2677329
Strand: Direct
Name: 126699933
Synonym: CD2315
Alternate gene names: NA
Gene position: 2676529-2677329 (Clockwise)
Preceding gene: 126699932
Following gene: 126699934
Centisome position: 62.39
GC content: 24.84
Gene sequence:
>801_bases ATGACATTTAAGAATAAAAAATTTACTATAAATAAATATAAAATTCTATCTATTATTCTAGTTTTATGTTTGATTTTAAC CGCTTTTAGTAGCTATGTGAATTATAGTCATAAAAAATTTAAAGATTATGTTGTCTTCTATGTTCAACATCAAGATGATG AAGTGTTGTGGGCTGGGAGTGCTATTGTTAATGCTATAAAAGAAAGAGGAAAAAATCATGTATTTGTGGTTTTAGTATCT ACTGGATGTGGTATATCCGTCTTTGATAAATATAAAAAATATGAAAACCTAACAAATATACAAAAATCAGAATATAGAAA TAGAGAATTTTTAGCTTCTCTTAATAGCCTTGGCGTAATAAGGGAAAATATAATATTATTACCAGAAACAAATACAAATG GTAATACTGACTTCAATTACATGGAAAAAATTGCTCTTACATTTGAAGAAAAATTTAAAAATGTAACTCATATAGCACAT ACTTATAAGTTAGATGACCATTTACAACATTTAAAAAATGGTTCTGTTATCCAAAATTTATATAATGCTGGTAAAATAAA AGATGCTAAATATTTTGTAAAACCTAAATTTGCTGATAAAATAACTTTTAATAATAAGATAGTTTATAAAGCTCATTCTA CTGAAGACTATGAAAAGGTTAAAAATGCCTGTCAACAATACAAAATTGTTGATGAATTAGAATATAGAGAAGGTATTGGC TATAAGTCTGACCATAAATCATTTGATAAGTTATTAAATAATAAAGATGTTCCTGCTATACTTCATACACCTAATTTATA A
Upstream 100 bases:
>100_bases TTATTCCATTAATCTACTCTATATTTTTCAGCATTTAAGAAATAATTTTTAGTACTTTGTTTGATAATATAACTAAGACA ACTTTTCAGGAGATGATTAA
Downstream 100 bases:
>100_bases GAAATATTTATTCTTTTAATTTAAGTTATAAAAAGGAAATTATTTGAGATTTTGTGATATAGCACTTTTTGTGCTATACT ACTTTTTCTCATACAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTFKNKKFTINKYKILSIILVLCLILTAFSSYVNYSHKKFKDYVVFYVQHQDDEVLWAGSAIVNAIKERGKNHVFVVLVS TGCGISVFDKYKKYENLTNIQKSEYRNREFLASLNSLGVIRENIILLPETNTNGNTDFNYMEKIALTFEEKFKNVTHIAH TYKLDDHLQHLKNGSVIQNLYNAGKIKDAKYFVKPKFADKITFNNKIVYKAHSTEDYEKVKNACQQYKIVDELEYREGIG YKSDHKSFDKLLNNKDVPAILHTPNL
Sequences:
>Translated_266_residues MTFKNKKFTINKYKILSIILVLCLILTAFSSYVNYSHKKFKDYVVFYVQHQDDEVLWAGSAIVNAIKERGKNHVFVVLVS TGCGISVFDKYKKYENLTNIQKSEYRNREFLASLNSLGVIRENIILLPETNTNGNTDFNYMEKIALTFEEKFKNVTHIAH TYKLDDHLQHLKNGSVIQNLYNAGKIKDAKYFVKPKFADKITFNNKIVYKAHSTEDYEKVKNACQQYKIVDELEYREGIG YKSDHKSFDKLLNNKDVPAILHTPNL >Mature_265_residues TFKNKKFTINKYKILSIILVLCLILTAFSSYVNYSHKKFKDYVVFYVQHQDDEVLWAGSAIVNAIKERGKNHVFVVLVST GCGISVFDKYKKYENLTNIQKSEYRNREFLASLNSLGVIRENIILLPETNTNGNTDFNYMEKIALTFEEKFKNVTHIAHT YKLDDHLQHLKNGSVIQNLYNAGKIKDAKYFVKPKFADKITFNNKIVYKAHSTEDYEKVKNACQQYKIVDELEYREGIGY KSDHKSFDKLLNNKDVPAILHTPNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30931; Mature: 30800
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKNKKFTINKYKILSIILVLCLILTAFSSYVNYSHKKFKDYVVFYVQHQDDEVLWAGS CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEECH AIVNAIKERGKNHVFVVLVSTGCGISVFDKYKKYENLTNIQKSEYRNREFLASLNSLGVI HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RENIILLPETNTNGNTDFNYMEKIALTFEEKFKNVTHIAHTYKLDDHLQHLKNGSVIQNL HHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YNAGKIKDAKYFVKPKFADKITFNNKIVYKAHSTEDYEKVKNACQQYKIVDELEYREGIG HHCCCCCCCEEEECCCCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC YKSDHKSFDKLLNNKDVPAILHTPNL CCCHHHHHHHHHCCCCCCEEEECCCC >Mature Secondary Structure TFKNKKFTINKYKILSIILVLCLILTAFSSYVNYSHKKFKDYVVFYVQHQDDEVLWAGS CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEECH AIVNAIKERGKNHVFVVLVSTGCGISVFDKYKKYENLTNIQKSEYRNREFLASLNSLGVI HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RENIILLPETNTNGNTDFNYMEKIALTFEEKFKNVTHIAHTYKLDDHLQHLKNGSVIQNL HHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YNAGKIKDAKYFVKPKFADKITFNNKIVYKAHSTEDYEKVKNACQQYKIVDELEYREGIG HHCCCCCCCEEEECCCCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC YKSDHKSFDKLLNNKDVPAILHTPNL CCCHHHHHHHHHCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA