| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is modA [C]
Identifier: 126699929
GI number: 126699929
Start: 2673187
End: 2673999
Strand: Direct
Name: modA [C]
Synonym: CD2311
Alternate gene names: 126699929
Gene position: 2673187-2673999 (Clockwise)
Preceding gene: 126699928
Following gene: 126699930
Centisome position: 62.31
GC content: 29.89
Gene sequence:
>813_bases ATGTTTAAAAAACTTTCAGTACTAGCTTTAGCTATGATTATTTCATTAAGTATTACTGCATGTAATTCTAAAGAAAACAA AGCTAATGATGAATCTAATACTAAAGTGACAACAGCTGATGATTCAAAAGAAAAAGAGACTCTTTTTGTCTATTCAGGGG CAGGTTTAAAGAAACCAATGGATGAAATAGCAAAAAAATTTGAGAAAGAAAATAATGTCAAAGTTGAATATAGCTATGCA GGTTCTGCACAGCTAATAGCTCAAATTGAGACAAGTCACAAAGGAGACGTATTTATTGTTGGTTCTGAACCAATTTATTC AAAGGCCTTTGAAAAAGAACTTGTAGGTGAACATAAAACGGTTGCACATCATACACCTGCAATAGTTGTACCTAAAGGAA ATCCAGCTAATATTCAAAAATTGGAAGACTTAAATAAAGATGGAGTTAAACTTATTTTGGGAGACAAAGAGTCTAATGCT ATAGGTAAAACTACACAAAAAATACTTGAAAAAAATAATTTAAAATCTATAAATGATAATGTTGTCTCTACAGCTGCAAC TGTAAATGAAATGATTGTACAGTTAACATCAAGTAAAGCTGATGCTACAATAGCCACAAAAGATTCAGTCTTTGGCAATG AAGATGTAGAAGTTATAGAAATTGCCCAAGATAAAAATATAGACCAACTTATATCAGCAGGAATCGTAAACTATAGTGAT AAAAAAGATTTAGCTAATAAATTTATAAATTATATAGAGTCAGACGAAGCTAAACAGATATTTAAAAAATATGGTTTTGA ACCTGTTAAGTAG
Upstream 100 bases:
>100_bases TAACAAAACATTATAAAACATAACAAAAACTTAGACATCGTTTTCTTAGTATGATATACTAAAAAAGAATTTACACTAAT TTACTAAGGGGGAATATCTT
Downstream 100 bases:
>100_bases TGATTAAACTTGAAAAATAAATTTTTTACTACACTACTTACTGGATTTTTTGCTATAGTCTTTTTGTTTATTGTATCACC ACTTCTTATGTTAATCATTA
Product: ABC transporter substrate-binding protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MFKKLSVLALAMIISLSITACNSKENKANDESNTKVTTADDSKEKETLFVYSGAGLKKPMDEIAKKFEKENNVKVEYSYA GSAQLIAQIETSHKGDVFIVGSEPIYSKAFEKELVGEHKTVAHHTPAIVVPKGNPANIQKLEDLNKDGVKLILGDKESNA IGKTTQKILEKNNLKSINDNVVSTAATVNEMIVQLTSSKADATIATKDSVFGNEDVEVIEIAQDKNIDQLISAGIVNYSD KKDLANKFINYIESDEAKQIFKKYGFEPVK
Sequences:
>Translated_270_residues MFKKLSVLALAMIISLSITACNSKENKANDESNTKVTTADDSKEKETLFVYSGAGLKKPMDEIAKKFEKENNVKVEYSYA GSAQLIAQIETSHKGDVFIVGSEPIYSKAFEKELVGEHKTVAHHTPAIVVPKGNPANIQKLEDLNKDGVKLILGDKESNA IGKTTQKILEKNNLKSINDNVVSTAATVNEMIVQLTSSKADATIATKDSVFGNEDVEVIEIAQDKNIDQLISAGIVNYSD KKDLANKFINYIESDEAKQIFKKYGFEPVK >Mature_270_residues MFKKLSVLALAMIISLSITACNSKENKANDESNTKVTTADDSKEKETLFVYSGAGLKKPMDEIAKKFEKENNVKVEYSYA GSAQLIAQIETSHKGDVFIVGSEPIYSKAFEKELVGEHKTVAHHTPAIVVPKGNPANIQKLEDLNKDGVKLILGDKESNA IGKTTQKILEKNNLKSINDNVVSTAATVNEMIVQLTSSKADATIATKDSVFGNEDVEVIEIAQDKNIDQLISAGIVNYSD KKDLANKFINYIESDEAKQIFKKYGFEPVK
Specific function: Probably involved in the binding-dependent system [H]
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein modA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 29606; Mature: 29606
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLSVLALAMIISLSITACNSKENKANDESNTKVTTADDSKEKETLFVYSGAGLKKPM CCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHH DEIAKKFEKENNVKVEYSYAGSAQLIAQIETSHKGDVFIVGSEPIYSKAFEKELVGEHKT HHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCE VAHHTPAIVVPKGNPANIQKLEDLNKDGVKLILGDKESNAIGKTTQKILEKNNLKSINDN EEECCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCH VVSTAATVNEMIVQLTSSKADATIATKDSVFGNEDVEVIEIAQDKNIDQLISAGIVNYSD HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCC KKDLANKFINYIESDEAKQIFKKYGFEPVK HHHHHHHHHHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MFKKLSVLALAMIISLSITACNSKENKANDESNTKVTTADDSKEKETLFVYSGAGLKKPM CCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHH DEIAKKFEKENNVKVEYSYAGSAQLIAQIETSHKGDVFIVGSEPIYSKAFEKELVGEHKT HHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCE VAHHTPAIVVPKGNPANIQKLEDLNKDGVKLILGDKESNAIGKTTQKILEKNNLKSINDN EEECCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCH VVSTAATVNEMIVQLTSSKADATIATKDSVFGNEDVEVIEIAQDKNIDQLISAGIVNYSD HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCC KKDLANKFINYIESDEAKQIFKKYGFEPVK HHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]