| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is modB [H]
Identifier: 126699930
GI number: 126699930
Start: 2674009
End: 2674800
Strand: Direct
Name: modB [H]
Synonym: CD2312
Alternate gene names: 126699930
Gene position: 2674009-2674800 (Clockwise)
Preceding gene: 126699929
Following gene: 126699931
Centisome position: 62.33
GC content: 28.79
Gene sequence:
>792_bases TTGAAAAATAAATTTTTTACTACACTACTTACTGGATTTTTTGCTATAGTCTTTTTGTTTATTGTATCACCACTTCTTAT GTTAATCATTAAAGGGATAAGTTATGTTCCTATATGCTTAAAATCAGTGGAAGTACAGTATGCAATAACACTTAGTATTA AAACATCTTTAATATCTACTATAGTATGCCTTTTATTAGCTATTCCAGTAGCATATTTTTTACATATTACTAAATTACCA TTTAAAAAACTGATTATACAGATAATAAATCTCCCTATGTCTCTTCCACACTTAGTATCAGGAATTGCTCTTTTACTTTT GTTTGGAAGAATGGGGATTGGAGATTCCATTTATAAGATTTTTAAGCTTGATTTTATATTTACAAAGCAAGGTATAGTTT TAGCACAAGTATTTGTAAATCTTCCACTTACTATTAAAATACTTCACACTTCACTAAATGAAAGTAATGAAAAGATGATA TTTGTTGCACGTACCCTTGGATGTAATAGTTGGGAAGCATTTAGATTTATAATTCTTCCAAATCTAAAAACTGGAATCAT ATCTGCAACTGTAATGACTTGGTCAAGAGCACTTGGTGAATTTGGTGCAGTAGCTATGATAGCAGGTTCTACACGTATGA AAACTGAAATTATTCCTACATCTATATATTTAAATATGTCTACTGGTGATATAGACATTGCAATCGGAATAGCTGTAATT TTGATATTTATCTCACTTACATGCTTGATGCTTTTTGAGATATTTTTTAATAGAGAGGTTGATAAGAATTAA
Upstream 100 bases:
>100_bases AAAAGATTTAGCTAATAAATTTATAAATTATATAGAGTCAGACGAAGCTAAACAGATATTTAAAAAATATGGTTTTGAAC CTGTTAAGTAGTGATTAAAC
Downstream 100 bases:
>100_bases TATGTTAAAAATAAAAAATTTATCTCTTGATTTACCTAATTTTAAATTACAAGAAAATAGTTTAAATATTAATAATCATG AATACTTTGTTTTATTAGGA
Product: ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLISTIVCLLLAIPVAYFLHITKLP FKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKIFKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMI FVARTLGCNSWEAFRFIILPNLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI LIFISLTCLMLFEIFFNREVDKN
Sequences:
>Translated_263_residues MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLISTIVCLLLAIPVAYFLHITKLP FKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKIFKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMI FVARTLGCNSWEAFRFIILPNLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI LIFISLTCLMLFEIFFNREVDKN >Mature_263_residues MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLISTIVCLLLAIPVAYFLHITKLP FKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKIFKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMI FVARTLGCNSWEAFRFIILPNLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI LIFISLTCLMLFEIFFNREVDKN
Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=198, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082099, Length=194, Percent_Identity=29.3814432989691, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786980, Length=216, Percent_Identity=33.7962962962963, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1786254, Length=205, Percent_Identity=26.3414634146341, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29323; Mature: 29323
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLIST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEEHHHHHHHH IVCLLLAIPVAYFLHITKLPFKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH FKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMIFVARTLGCNSWEAFRFIILP HHHHHEEECCCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEC NLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECEEEEEEECCCCCHHHHHHHHH LIFISLTCLMLFEIFFNREVDKN HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKNKFFTTLLTGFFAIVFLFIVSPLLMLIIKGISYVPICLKSVEVQYAITLSIKTSLIST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEEHHHHHHHH IVCLLLAIPVAYFLHITKLPFKKLIIQIINLPMSLPHLVSGIALLLLFGRMGIGDSIYKI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH FKLDFIFTKQGIVLAQVFVNLPLTIKILHTSLNESNEKMIFVARTLGCNSWEAFRFIILP HHHHHEEECCCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEC NLKTGIISATVMTWSRALGEFGAVAMIAGSTRMKTEIIPTSIYLNMSTGDIDIAIGIAVI CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECEEEEEEECCCCCHHHHHHHHH LIFISLTCLMLFEIFFNREVDKN HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]