Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699923

Identifier: 126699923

GI number: 126699923

Start: 2670228

End: 2670410

Strand: Direct

Name: 126699923

Synonym: CD2305A

Alternate gene names: NA

Gene position: 2670228-2670410 (Clockwise)

Preceding gene: 126699922

Following gene: 126699925

Centisome position: 62.24

GC content: 18.58

Gene sequence:

>240_bases
GTGTGCCTCAGGAAAGCCACATTAAAAAACAGTGGTATCATTATTAATCAAAAGTAAGTTAGATGTATTATCAAAAAATT
AGAACTTAAATGCATAGTATTTTTTCATAAATCACATAAATATAACTCCTATAAATGTATAATTGGAAAAGTAAAAAATA
ATAAAACAAATAGAAGATTTAAAACATCAATAGCATATCAGAAAATAACAAATGATATGCTAGAATTTATAAAATATATC

Upstream 100 bases:

>100_bases
AAAAACAAAAACACTAAAGAAAAAATAAATTAACAAGAGAACAAGAATTAGAATATGAAAATAAATTTTTAAAAGATGAG
CTTGAGTTTTTAAAAAAGAT

Downstream 100 bases:

>100_bases
TAATGATAAAAATGGAAAATCAATTATAAAAAAGGCATATCTCGATTCATTTTTTGTTATATAGTCAAATAAGAATACTA
TAGATGAAAGATACGATTTT

Product: transposase (partial)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>79_residues
VCLRKATLKNSGIIINQKVRCIIKKLELKCIVFFHKSHKYNSYKCIIGKVKNNKTNRRFKTSIAYQKITNDMLEFIKYI

Sequences:

>Translated_61_residues
DIFYKF*HIICYFLICY*CFKSSICFIIFYFSNYTFIGVIFM*FMKKYYAFKF*FFDNTSN
>Mature_61_residues
DIFYKF*HIICYFLICY*CFKSSICFIIFYFSNYTFIGVIFM*FMKKYYAFKF*FFDNTSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7084; Mature: 7084

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
DIFYKFHIICYFLICYCFKSSICFIIFYFSNYTFIGVIFMFMKKYYAFKFFFDNTSN
CCCHHHHHHHHHHHHHHHHCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA