| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699925
Identifier: 126699925
GI number: 126699925
Start: 2671076
End: 2671426
Strand: Direct
Name: 126699925
Synonym: CD2307
Alternate gene names: NA
Gene position: 2671076-2671426 (Clockwise)
Preceding gene: 126699923
Following gene: 126699926
Centisome position: 62.26
GC content: 27.07
Gene sequence:
>351_bases ATGATTCAGAAAAAATTTTTTATGGGTTTTTGTGGTTTCCTTGGATTTTTAAGTCTTAGATATTTTTCATCTGGCAATGT TGCTGACCTTACATATATTGGATTTTTTGCTTTTTTCTCAAACTTTATTATAGCAAAAATAAATGGTGATAAAGCAGATG AAAGGTATGTACAAGATGAAAAAGCAGCTATGGCATTTACAGGACAGCTTGCTATTATAGAATTATTCATTTTATGGTGT ATTACTATAGTGTCTAGGAATGTAGAATTAATGTGTGTTTTACTATCAATTACATATGCAATCACTTTAAATGTTTATGC TATAAAACTTTATATTTTAGAGGAAAAATAA
Upstream 100 bases:
>100_bases ATAATACTGATTTTCTATTGACAAAAGAATATAAAAGAGATATATTTGTATCATAAAGATATAAATATATCTCTTTTAAA ATTACTAAGGAGGATAAAAA
Downstream 100 bases:
>100_bases TATGCCCAAATTCATTTGTAACCTAAAAAAATATAGACAATTAAAAGAATTAACTCAAGAACAATTAGCAGAAAAAGTAG GAGTTAGAAGAGAAACCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDEKAAMAFTGQLAIIELFILWC ITIVSRNVELMCVLLSITYAITLNVYAIKLYILEEK
Sequences:
>Translated_116_residues MIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDEKAAMAFTGQLAIIELFILWC ITIVSRNVELMCVLLSITYAITLNVYAIKLYILEEK >Mature_116_residues MIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDEKAAMAFTGQLAIIELFILWC ITIVSRNVELMCVLLSITYAITLNVYAIKLYILEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13275; Mature: 13275
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDE CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHH KAAMAFTGQLAIIELFILWCITIVSRNVELMCVLLSITYAITLNVYAIKLYILEEK HHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEEEEEEECC >Mature Secondary Structure MIQKKFFMGFCGFLGFLSLRYFSSGNVADLTYIGFFAFFSNFIIAKINGDKADERYVQDE CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHH KAAMAFTGQLAIIELFILWCITIVSRNVELMCVLLSITYAITLNVYAIKLYILEEK HHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA