The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699839

Identifier: 126699839

GI number: 126699839

Start: 2573007

End: 2573933

Strand: Direct

Name: 126699839

Synonym: CD2222

Alternate gene names: NA

Gene position: 2573007-2573933 (Clockwise)

Preceding gene: 126699837

Following gene: 126699840

Centisome position: 59.97

GC content: 31.39

Gene sequence:

>927_bases
ATGAGTGATATTTTAAGTAGAATTACAAATAAAATTGGGGATAAGAATATAGTTGATAAGTTATCAGCTCTATCAAAATC
AGATTTGAACTCACTTCTATTAGAAGTGTTTGATAGACAAGCAAATACTTTAACTGCAACTGATATTCTAAAGTCATACC
AACTAAATAGATTTACTATCCCTAGCGGTATAGATCCAGAAGAAATTCATGCTTTGGAATCAAAATTATTGAGAAAAGCA
TTCAATATGGATATCAAGACGATTATGCTTTCTCCCTCTGCCCCATTAGGTAGCTGTAGCGTTTTTGGCTCCGTAGATCA
ATATAACGTAGTAAGTGCTCTACGAGGGACAGAAACACTTGCAGACCCCTCAAATATGTTGGCAATAATTATTGCTGATA
AATTAAAAAGAAAAGAAGAAAATAATACCATACCTATCCACATGGCTACTACTGCTAGGGTAATAAGAGCACAAAATTTT
GTAGGTAAAGGTTTATATTCACATTTTGGCTTATATTGTATGGTTTCATCTGGTATAGATACAGGGTCTTACACTTGTGA
AAAAATGTTGTTAGAAAAGCACTTAAACTATTATAAAGATATATTAAGTGAAATAGAAAATGTTCGTTTCTCTATTATTC
TACGCAAAAGAAACGGATACAAAGATAATGACGGATTTTTCGACAGAATGGTTGAAACTATCAAACTTATTTTTCCTAAT
ATAGAGTTATCAATTCATAATGATGATGTTGATAATAATTATTATAAAGGTATCAATTTCAAATTATCGGTCAAACAAGG
AAATGAAACCGTTGAAATAGTTGACGGTGGATTTGTTGACTGGACTTATCAAATGCTTGGAAATAAAAAAGAACGCTGTT
TGATAAGTGGTATTGGCTTAGAAAGATTTCTTGTAGCTGTTTCATAA

Upstream 100 bases:

>100_bases
AGTAAATATTCAGTGTTTTTTCATTTTTGGTCAAATGACCTAGATTAGTTGTTGTAACAATTCTATAATTATTTTGAAAG
TAACAGTATGGAGGATAACT

Downstream 100 bases:

>100_bases
AAGGAGAAGAAAAATGGAACTTATAGAGTGGAATTATGCTTATATTACCGATTTAGTTGAGTTTGCGAATGATAAAGAAA
TTGCAAACAATCTTCGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSDILSRITNKIGDKNIVDKLSALSKSDLNSLLLEVFDRQANTLTATDILKSYQLNRFTIPSGIDPEEIHALESKLLRKA
FNMDIKTIMLSPSAPLGSCSVFGSVDQYNVVSALRGTETLADPSNMLAIIIADKLKRKEENNTIPIHMATTARVIRAQNF
VGKGLYSHFGLYCMVSSGIDTGSYTCEKMLLEKHLNYYKDILSEIENVRFSIILRKRNGYKDNDGFFDRMVETIKLIFPN
IELSIHNDDVDNNYYKGINFKLSVKQGNETVEIVDGGFVDWTYQMLGNKKERCLISGIGLERFLVAVS

Sequences:

>Translated_308_residues
MSDILSRITNKIGDKNIVDKLSALSKSDLNSLLLEVFDRQANTLTATDILKSYQLNRFTIPSGIDPEEIHALESKLLRKA
FNMDIKTIMLSPSAPLGSCSVFGSVDQYNVVSALRGTETLADPSNMLAIIIADKLKRKEENNTIPIHMATTARVIRAQNF
VGKGLYSHFGLYCMVSSGIDTGSYTCEKMLLEKHLNYYKDILSEIENVRFSIILRKRNGYKDNDGFFDRMVETIKLIFPN
IELSIHNDDVDNNYYKGINFKLSVKQGNETVEIVDGGFVDWTYQMLGNKKERCLISGIGLERFLVAVS
>Mature_307_residues
SDILSRITNKIGDKNIVDKLSALSKSDLNSLLLEVFDRQANTLTATDILKSYQLNRFTIPSGIDPEEIHALESKLLRKAF
NMDIKTIMLSPSAPLGSCSVFGSVDQYNVVSALRGTETLADPSNMLAIIIADKLKRKEENNTIPIHMATTARVIRAQNFV
GKGLYSHFGLYCMVSSGIDTGSYTCEKMLLEKHLNYYKDILSEIENVRFSIILRKRNGYKDNDGFFDRMVETIKLIFPNI
ELSIHNDDVDNNYYKGINFKLSVKQGNETVEIVDGGFVDWTYQMLGNKKERCLISGIGLERFLVAVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34658; Mature: 34527

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDILSRITNKIGDKNIVDKLSALSKSDLNSLLLEVFDRQANTLTATDILKSYQLNRFTI
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEC
PSGIDPEEIHALESKLLRKAFNMDIKTIMLSPSAPLGSCSVFGSVDQYNVVSALRGTETL
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHCCCCC
ADPSNMLAIIIADKLKRKEENNTIPIHMATTARVIRAQNFVGKGLYSHFGLYCMVSSGID
CCCCCEEEEEEEHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
TGSYTCEKMLLEKHLNYYKDILSEIENVRFSIILRKRNGYKDNDGFFDRMVETIKLIFPN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
IELSIHNDDVDNNYYKGINFKLSVKQGNETVEIVDGGFVDWTYQMLGNKKERCLISGIGL
EEEEEECCCCCCCEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCH
ERFLVAVS
HHEEEECC
>Mature Secondary Structure 
SDILSRITNKIGDKNIVDKLSALSKSDLNSLLLEVFDRQANTLTATDILKSYQLNRFTI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEC
PSGIDPEEIHALESKLLRKAFNMDIKTIMLSPSAPLGSCSVFGSVDQYNVVSALRGTETL
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCHHHHHHHHHCCCCC
ADPSNMLAIIIADKLKRKEENNTIPIHMATTARVIRAQNFVGKGLYSHFGLYCMVSSGID
CCCCCEEEEEEEHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
TGSYTCEKMLLEKHLNYYKDILSEIENVRFSIILRKRNGYKDNDGFFDRMVETIKLIFPN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
IELSIHNDDVDNNYYKGINFKLSVKQGNETVEIVDGGFVDWTYQMLGNKKERCLISGIGL
EEEEEECCCCCCCEECCCEEEEEEECCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCH
ERFLVAVS
HHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA