| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699837
Identifier: 126699837
GI number: 126699837
Start: 2571708
End: 2572328
Strand: Direct
Name: 126699837
Synonym: CD2220
Alternate gene names: NA
Gene position: 2571708-2572328 (Clockwise)
Preceding gene: 126699836
Following gene: 126699839
Centisome position: 59.94
GC content: 29.15
Gene sequence:
>621_bases ATGCATTTAATTGATTTTATGAATGAAGATATTAAAAAGAAGCTTGTTAAAAAAACGTATAAAAAGAAAGAGACTATTCT TTTTGCTGAGCAAGAAAATGAATATGTAATTCTTATGATTGACGGTATTGCAGAAGCATTCATCTTAAATGTGAAAGGAA ACATCTCAACTATTCATCTTTATAGAAGTGGTAGTTTTTTTGGAGAAATGGAACAATTTAATGATGGGAAAAAACCCGTT GAAATTGTCGCTTTCACAGATTGTAATGTATATAAACTTCATAGAGATGATTTTTTAAACTGGTTAAGGGGAGATTTTGA AGCTACAAAATTTCTGATTCGAGAAATATCTAGTAAATTAGTTGTAAATGCTGAATTAATTGAAGAATTATCATCTTTAA GTGTTAAAGAACGACTTCTGAGGTGTATATCCTTACACTATTATAGAAGTGAATTAAATCTGCTTACCAAAAAACAGCTT GCTAGCGAAGTAAACGCTCCAATTAGAAGCATTAATCGTGCTATAAATGAATGTGTACAAGAACATCTAATTGCTTATGA AAACAAAAGATTTAGTGTAATTAATCAGCGAGAGGTATTAAAGAATCTTCCTACAACATAA
Upstream 100 bases:
>100_bases AATAATGGAATAGTTTCTATGTAAATATATTTTTACTATCTTACCTAACTAATTGAAAGATGATATAATTTAATCAAAGA TTTGGTAAGGAGGGATGAAT
Downstream 100 bases:
>100_bases GTATAATTTCAAAAAAGTATTGAATAATAATTATTCAATGCTTTTTTATTTCGGGTCAAGTGACCTATTTTTTTTTATTT CTTCATTATATAATACTCCT
Product: cAMP-binding regulatory protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHLYRSGSFFGEMEQFNDGKKPV EIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKLVVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQL ASEVNAPIRSINRAINECVQEHLIAYENKRFSVINQREVLKNLPTT
Sequences:
>Translated_206_residues MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHLYRSGSFFGEMEQFNDGKKPV EIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKLVVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQL ASEVNAPIRSINRAINECVQEHLIAYENKRFSVINQREVLKNLPTT >Mature_206_residues MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHLYRSGSFFGEMEQFNDGKKPV EIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKLVVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQL ASEVNAPIRSINRAINECVQEHLIAYENKRFSVINQREVLKNLPTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24063; Mature: 24063
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHL CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEEE YRSGSFFGEMEQFNDGKKPVEIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKL EECCCCHHHHHHHCCCCCCEEEEEECCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH VVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQLASEVNAPIRSINRAINECVQ EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHLIAYENKRFSVINQREVLKNLPTT HHHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHL CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEEE YRSGSFFGEMEQFNDGKKPVEIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKL EECCCCHHHHHHHCCCCCCEEEEEECCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH VVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQLASEVNAPIRSINRAINECVQ EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHLIAYENKRFSVINQREVLKNLPTT HHHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA