Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699837

Identifier: 126699837

GI number: 126699837

Start: 2571708

End: 2572328

Strand: Direct

Name: 126699837

Synonym: CD2220

Alternate gene names: NA

Gene position: 2571708-2572328 (Clockwise)

Preceding gene: 126699836

Following gene: 126699839

Centisome position: 59.94

GC content: 29.15

Gene sequence:

>621_bases
ATGCATTTAATTGATTTTATGAATGAAGATATTAAAAAGAAGCTTGTTAAAAAAACGTATAAAAAGAAAGAGACTATTCT
TTTTGCTGAGCAAGAAAATGAATATGTAATTCTTATGATTGACGGTATTGCAGAAGCATTCATCTTAAATGTGAAAGGAA
ACATCTCAACTATTCATCTTTATAGAAGTGGTAGTTTTTTTGGAGAAATGGAACAATTTAATGATGGGAAAAAACCCGTT
GAAATTGTCGCTTTCACAGATTGTAATGTATATAAACTTCATAGAGATGATTTTTTAAACTGGTTAAGGGGAGATTTTGA
AGCTACAAAATTTCTGATTCGAGAAATATCTAGTAAATTAGTTGTAAATGCTGAATTAATTGAAGAATTATCATCTTTAA
GTGTTAAAGAACGACTTCTGAGGTGTATATCCTTACACTATTATAGAAGTGAATTAAATCTGCTTACCAAAAAACAGCTT
GCTAGCGAAGTAAACGCTCCAATTAGAAGCATTAATCGTGCTATAAATGAATGTGTACAAGAACATCTAATTGCTTATGA
AAACAAAAGATTTAGTGTAATTAATCAGCGAGAGGTATTAAAGAATCTTCCTACAACATAA

Upstream 100 bases:

>100_bases
AATAATGGAATAGTTTCTATGTAAATATATTTTTACTATCTTACCTAACTAATTGAAAGATGATATAATTTAATCAAAGA
TTTGGTAAGGAGGGATGAAT

Downstream 100 bases:

>100_bases
GTATAATTTCAAAAAAGTATTGAATAATAATTATTCAATGCTTTTTTATTTCGGGTCAAGTGACCTATTTTTTTTTATTT
CTTCATTATATAATACTCCT

Product: cAMP-binding regulatory protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHLYRSGSFFGEMEQFNDGKKPV
EIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKLVVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQL
ASEVNAPIRSINRAINECVQEHLIAYENKRFSVINQREVLKNLPTT

Sequences:

>Translated_206_residues
MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHLYRSGSFFGEMEQFNDGKKPV
EIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKLVVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQL
ASEVNAPIRSINRAINECVQEHLIAYENKRFSVINQREVLKNLPTT
>Mature_206_residues
MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHLYRSGSFFGEMEQFNDGKKPV
EIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKLVVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQL
ASEVNAPIRSINRAINECVQEHLIAYENKRFSVINQREVLKNLPTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24063; Mature: 24063

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHL
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEEE
YRSGSFFGEMEQFNDGKKPVEIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKL
EECCCCHHHHHHHCCCCCCEEEEEECCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH
VVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQLASEVNAPIRSINRAINECVQ
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHLIAYENKRFSVINQREVLKNLPTT
HHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHLIDFMNEDIKKKLVKKTYKKKETILFAEQENEYVILMIDGIAEAFILNVKGNISTIHL
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEEE
YRSGSFFGEMEQFNDGKKPVEIVAFTDCNVYKLHRDDFLNWLRGDFEATKFLIREISSKL
EECCCCHHHHHHHCCCCCCEEEEEECCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH
VVNAELIEELSSLSVKERLLRCISLHYYRSELNLLTKKQLASEVNAPIRSINRAINECVQ
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHLIAYENKRFSVINQREVLKNLPTT
HHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA