The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699601

Identifier: 126699601

GI number: 126699601

Start: 2299249

End: 2300094

Strand: Direct

Name: 126699601

Synonym: CD1992

Alternate gene names: NA

Gene position: 2299249-2300094 (Clockwise)

Preceding gene: 126699600

Following gene: 126699613

Centisome position: 53.59

GC content: 22.81

Gene sequence:

>846_bases
ATGAATATTATTAAAAGCATAACTTTACTCTTAACATTATTAATTGTGATATTAATGACAGGCTGTTCCCCAAGAGAAAG
TGCTAGTGAAGTTGCAAAAAAATATATTGATAAGATGAACTCTGGTGACTATGAAACAGCATATAGTTTATTAAGTAAAG
ATAGTAAAAAAAAAATTAGTATAGAAAATCTTGAAGAATTTCAAAATATTTTAGTTAGTACAAAAAGAATAATTAGTTAT
AAAATAGGTAAAGAAAAAATCATAAAAAAATATAAACATGATGGAAAAGAATATAAAAATGTTGTTAAATTAGAAGAAAC
TTTTAATATAAAAAACCTTCTTTATAAAAAAGATGATTCTCTAAAAGTAAATAGATATTTTGTAGTTGAAAATAACAAAT
ACAAGCTATTATTGTATGAAAGTTTCAAAAAAGAATTTGGTATTAATAGTATGGACCTTGCTCAACTTAAGCTTAATGAT
TTTGGACTAAAATACTTTAAAGAAGTTGACCTTATACTAAAAAAAGCTATTGCTATTAATCCTACTGATTCAAAGCTTTA
TTATGCCCAAGCATGTAATTATATGAATTTTGATGGATTTCCTGGTTATTCAGATACAACATATAATGCTTTAGATTCAA
TTAATAAATCTTTAAAGTATTTAGATAAAAATGATTCTGACTACAAAAAAAATGCAAGTAATATATATAACTTAAAAGGA
GTTATTCTTATGTTTCACAAAAGATTTGATGAAGCACAACAATATTTAAATAAAGCCTTATACTTTAACAAAGATAATGA
AGACCCAAAATATAATCTAAATACAATAAAAAAACATCTAAACTAG

Upstream 100 bases:

>100_bases
TTGAGCAAAATACTATTTATTGTATTTTAAAGAAGATGACTTATTCAATATTTGATGCTAGAATATAATTAATAAAAATT
TAATTATAGGTGATTGTATT

Downstream 100 bases:

>100_bases
ATATTTAATTTTTGAATTTATAAAATATTTTTTTATGTATAATTCAGCACTGAATCATAATCTCTACTAAACTAATTACA
AGTTTAAATTATAAAGACTT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNIIKSITLLLTLLIVILMTGCSPRESASEVAKKYIDKMNSGDYETAYSLLSKDSKKKISIENLEEFQNILVSTKRIISY
KIGKEKIIKKYKHDGKEYKNVVKLEETFNIKNLLYKKDDSLKVNRYFVVENNKYKLLLYESFKKEFGINSMDLAQLKLND
FGLKYFKEVDLILKKAIAINPTDSKLYYAQACNYMNFDGFPGYSDTTYNALDSINKSLKYLDKNDSDYKKNASNIYNLKG
VILMFHKRFDEAQQYLNKALYFNKDNEDPKYNLNTIKKHLN

Sequences:

>Translated_281_residues
MNIIKSITLLLTLLIVILMTGCSPRESASEVAKKYIDKMNSGDYETAYSLLSKDSKKKISIENLEEFQNILVSTKRIISY
KIGKEKIIKKYKHDGKEYKNVVKLEETFNIKNLLYKKDDSLKVNRYFVVENNKYKLLLYESFKKEFGINSMDLAQLKLND
FGLKYFKEVDLILKKAIAINPTDSKLYYAQACNYMNFDGFPGYSDTTYNALDSINKSLKYLDKNDSDYKKNASNIYNLKG
VILMFHKRFDEAQQYLNKALYFNKDNEDPKYNLNTIKKHLN
>Mature_281_residues
MNIIKSITLLLTLLIVILMTGCSPRESASEVAKKYIDKMNSGDYETAYSLLSKDSKKKISIENLEEFQNILVSTKRIISY
KIGKEKIIKKYKHDGKEYKNVVKLEETFNIKNLLYKKDDSLKVNRYFVVENNKYKLLLYESFKKEFGINSMDLAQLKLND
FGLKYFKEVDLILKKAIAINPTDSKLYYAQACNYMNFDGFPGYSDTTYNALDSINKSLKYLDKNDSDYKKNASNIYNLKG
VILMFHKRFDEAQQYLNKALYFNKDNEDPKYNLNTIKKHLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32853; Mature: 32853

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIKSITLLLTLLIVILMTGCSPRESASEVAKKYIDKMNSGDYETAYSLLSKDSKKKIS
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC
IENLEEFQNILVSTKRIISYKIGKEKIIKKYKHDGKEYKNVVKLEETFNIKNLLYKKDDS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHEECCCC
LKVNRYFVVENNKYKLLLYESFKKEFGINSMDLAQLKLNDFGLKYFKEVDLILKKAIAIN
EEEEEEEEEECCCEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTDSKLYYAQACNYMNFDGFPGYSDTTYNALDSINKSLKYLDKNDSDYKKNASNIYNLKG
CCCCCEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHH
VILMFHKRFDEAQQYLNKALYFNKDNEDPKYNLNTIKKHLN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MNIIKSITLLLTLLIVILMTGCSPRESASEVAKKYIDKMNSGDYETAYSLLSKDSKKKIS
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC
IENLEEFQNILVSTKRIISYKIGKEKIIKKYKHDGKEYKNVVKLEETFNIKNLLYKKDDS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHEECCCC
LKVNRYFVVENNKYKLLLYESFKKEFGINSMDLAQLKLNDFGLKYFKEVDLILKKAIAIN
EEEEEEEEEECCCEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTDSKLYYAQACNYMNFDGFPGYSDTTYNALDSINKSLKYLDKNDSDYKKNASNIYNLKG
CCCCCEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHH
VILMFHKRFDEAQQYLNKALYFNKDNEDPKYNLNTIKKHLN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA