Click here to switch to the map view.

The map label for this gene is 126699613

Identifier: 126699613

GI number: 126699613

Start: 2312450

End: 2312809

Strand: Direct

Name: 126699613

Synonym: CD2002

Alternate gene names: NA

Gene position: 2312450-2312809 (Clockwise)

Preceding gene: 126699601

Following gene: 126699632

Centisome position: 53.9

GC content: 37.5

Gene sequence:

>360_bases
ATGAGAAAAAAGAAAGATACGCACAGCTTTGATTTTCGTCCTTTAGGACTGGCAATCAGAGAAGCCAGAGAGAAAGCAGG
GTTTTCCAGAAATGATTTAGGCGATAAAGTCTTTTACGGAGAACGTCATATCGCAGATATTGAAAATATCGGGAAACACC
CTAGCTTTCATTTATTCCATGATTTAGTTACCATGTTCAATATATCTGTTGACGAGTATTTCTATCCAGCGAAGAATGTG
GAAAAAAGCACAGTTCGCCGTCAGATAGATTCGTCACTTGATTTATTGAGTGATGACGAATTAAAAATCATTCAAGGTAC
GATTGATGGTATCTTGAACAGCAGAGAGAATAAGAAGTGA

Upstream 100 bases:

>100_bases
GTTGTCGGTGCCGGCTGCCTGTTTTACTTAGAATCACAAATTGCTCCTTGAGCAGAGCAAACCTGTGAAAATAGTATAAA
CTCATGCTAGGTGATTAAAA

Downstream 100 bases:

>100_bases
TTCACTTCTTATTTTCTCTGTTTTTCTGTGCAGATTCTTCAACGCTTATTTGTTGATATACTCCGCAGGTAACAAATAGT
CGTAAATCAAACTTTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MRKKKDTHSFDFRPLGLAIREAREKAGFSRNDLGDKVFYGERHIADIENIGKHPSFHLFHDLVTMFNISVDEYFYPAKNV
EKSTVRRQIDSSLDLLSDDELKIIQGTIDGILNSRENKK

Sequences:

>Translated_119_residues
MRKKKDTHSFDFRPLGLAIREAREKAGFSRNDLGDKVFYGERHIADIENIGKHPSFHLFHDLVTMFNISVDEYFYPAKNV
EKSTVRRQIDSSLDLLSDDELKIIQGTIDGILNSRENKK
>Mature_119_residues
MRKKKDTHSFDFRPLGLAIREAREKAGFSRNDLGDKVFYGERHIADIENIGKHPSFHLFHDLVTMFNISVDEYFYPAKNV
EKSTVRRQIDSSLDLLSDDELKIIQGTIDGILNSRENKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13797; Mature: 13797

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKKDTHSFDFRPLGLAIREAREKAGFSRNDLGDKVFYGERHIADIENIGKHPSFHLFH
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHCCCCCCHHHHH
DLVTMFNISVDEYFYPAKNVEKSTVRRQIDSSLDLLSDDELKIIQGTIDGILNSRENKK
HHHHHHCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKKKDTHSFDFRPLGLAIREAREKAGFSRNDLGDKVFYGERHIADIENIGKHPSFHLFH
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHCCCCCCHHHHH
DLVTMFNISVDEYFYPAKNVEKSTVRRQIDSSLDLLSDDELKIIQGTIDGILNSRENKK
HHHHHHCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA