| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699513
Identifier: 126699513
GI number: 126699513
Start: 2204241
End: 2204777
Strand: Direct
Name: 126699513
Synonym: CD1903
Alternate gene names: NA
Gene position: 2204241-2204777 (Clockwise)
Preceding gene: 126699511
Following gene: 126699516
Centisome position: 51.38
GC content: 27.19
Gene sequence:
>537_bases TTGCAAGGAGGTGTTAATATCAGGCAAGTAAAGTCTTTTGTTTTTCCAGTTATATCCTTAATATTCTTAGACCAAATTAG CAAAGTTCTTATAGGATTATTCTTAATGGACTTTGAAATTGATATAATTGGGAAATTTTTAAGATTCAATCCTGTTCAAA ATACAAATCTATCTTATGGGGGAAACTTTATTGGTATTCTATCTAATTTATGGGTATTGGTATTGTTTAACATTTTAGTT ATATTAGTTATTATATCTGGATATGCTTTTTATAAATCAAAAAATGAACAAACAAGCTATTCAGTAAAAGTAATTATGTC TTGTGGACTTGCTGGTACAATATGTAGCTTGATAGATAAATTATTTTGGGGAGGAAGTTTAGATTTTTTGCAGATACCAA GCTTTTTTATTTTCGACTTAAAAGACTGCTACCTTACTGTTGCAGAAATAATATTTGTTGTCATAGGAATTTTGCATAAT AGAGAAATATCAATGAAAGAATACATATATTTTTGCTATCGTCAGTTTAAAAGATAA
Upstream 100 bases:
>100_bases TTGATAATTTACCCATGTTATAATTATTGATGTGAAATTAATAAATCGAAATTCCTTTTTTAGATTTAACAATACTGAGT AAGGAAAAAGTGAATGACTT
Downstream 100 bases:
>100_bases ATTTAGAAGATAAATTTAAGTTTCAAGGTAAACTTATTTAATCACAGCAAATAGTTGGCTTACTTAAGCTTTTGGGCTAA ACTGTGAGCACTAATTAAGT
Product: lipoprotein signal peptidase
Products: NA
Alternate protein names: Signal Peptidase
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYGGNFIGILSNLWVLVLFNILV ILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDKLFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHN REISMKEYIYFCYRQFKR
Sequences:
>Translated_178_residues MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYGGNFIGILSNLWVLVLFNILV ILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDKLFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHN REISMKEYIYFCYRQFKR >Mature_178_residues MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYGGNFIGILSNLWVLVLFNILV ILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDKLFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHN REISMKEYIYFCYRQFKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.23.36
Molecular weight: Translated: 20420; Mature: 20420
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GNFIGILSNLWVLVLFNILVILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH LFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHNREISMKEYIYFCYRQFKR HHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GNFIGILSNLWVLVLFNILVILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH LFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHNREISMKEYIYFCYRQFKR HHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA