Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126699513

Identifier: 126699513

GI number: 126699513

Start: 2204241

End: 2204777

Strand: Direct

Name: 126699513

Synonym: CD1903

Alternate gene names: NA

Gene position: 2204241-2204777 (Clockwise)

Preceding gene: 126699511

Following gene: 126699516

Centisome position: 51.38

GC content: 27.19

Gene sequence:

>537_bases
TTGCAAGGAGGTGTTAATATCAGGCAAGTAAAGTCTTTTGTTTTTCCAGTTATATCCTTAATATTCTTAGACCAAATTAG
CAAAGTTCTTATAGGATTATTCTTAATGGACTTTGAAATTGATATAATTGGGAAATTTTTAAGATTCAATCCTGTTCAAA
ATACAAATCTATCTTATGGGGGAAACTTTATTGGTATTCTATCTAATTTATGGGTATTGGTATTGTTTAACATTTTAGTT
ATATTAGTTATTATATCTGGATATGCTTTTTATAAATCAAAAAATGAACAAACAAGCTATTCAGTAAAAGTAATTATGTC
TTGTGGACTTGCTGGTACAATATGTAGCTTGATAGATAAATTATTTTGGGGAGGAAGTTTAGATTTTTTGCAGATACCAA
GCTTTTTTATTTTCGACTTAAAAGACTGCTACCTTACTGTTGCAGAAATAATATTTGTTGTCATAGGAATTTTGCATAAT
AGAGAAATATCAATGAAAGAATACATATATTTTTGCTATCGTCAGTTTAAAAGATAA

Upstream 100 bases:

>100_bases
TTGATAATTTACCCATGTTATAATTATTGATGTGAAATTAATAAATCGAAATTCCTTTTTTAGATTTAACAATACTGAGT
AAGGAAAAAGTGAATGACTT

Downstream 100 bases:

>100_bases
ATTTAGAAGATAAATTTAAGTTTCAAGGTAAACTTATTTAATCACAGCAAATAGTTGGCTTACTTAAGCTTTTGGGCTAA
ACTGTGAGCACTAATTAAGT

Product: lipoprotein signal peptidase

Products: NA

Alternate protein names: Signal Peptidase

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYGGNFIGILSNLWVLVLFNILV
ILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDKLFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHN
REISMKEYIYFCYRQFKR

Sequences:

>Translated_178_residues
MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYGGNFIGILSNLWVLVLFNILV
ILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDKLFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHN
REISMKEYIYFCYRQFKR
>Mature_178_residues
MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYGGNFIGILSNLWVLVLFNILV
ILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDKLFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHN
REISMKEYIYFCYRQFKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.36

Molecular weight: Translated: 20420; Mature: 20420

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GNFIGILSNLWVLVLFNILVILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHNREISMKEYIYFCYRQFKR
HHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGGVNIRQVKSFVFPVISLIFLDQISKVLIGLFLMDFEIDIIGKFLRFNPVQNTNLSYG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GNFIGILSNLWVLVLFNILVILVIISGYAFYKSKNEQTSYSVKVIMSCGLAGTICSLIDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LFWGGSLDFLQIPSFFIFDLKDCYLTVAEIIFVVIGILHNREISMKEYIYFCYRQFKR
HHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA