| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699483
Identifier: 126699483
GI number: 126699483
Start: 2173276
End: 2173428
Strand: Direct
Name: 126699483
Synonym: CD1871A
Alternate gene names: NA
Gene position: 2173276-2173428 (Clockwise)
Preceding gene: 126699482
Following gene: 126699484
Centisome position: 50.66
GC content: 31.37
Gene sequence:
>153_bases ATGGTTAATAAGTTTTTAAAAAGCCGTGCCTTGTCTTTATTAATTATCTTTATTAGTATGGCGATGATTTACTATGGTCA TAGTAATGGAGAAACTAAAGTTGTCTTGGATAAGGCGATAAGAATTTGTATGGAGTGTATTGGAATTGGATAG
Upstream 100 bases:
>100_bases TACTTATTCTGGGGCAAAGAGTGCAAAGGAATGGAAGCAGGTAATTGAAAAAGAATTGGAAAAAATAAAAAATAAATAAA AGTAAAGCGGTGATTGGTAT
Downstream 100 bases:
>100_bases AATTAAAAATATTATAAATGGTAGTACAAAAAAAGATAAATATAAAATAAGAGATCGTTTTAGGCATTTATTTCAATCCG TTTGGTTTTTAATTACTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG
Sequences:
>Translated_50_residues MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG >Mature_50_residues MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5593; Mature: 5593
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 12.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVNKFLKSRALSLLIIFISMAMIYYGHSNGETKVVLDKAIRICMECIGIG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA