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The map label for this gene is yccM [C]

Identifier: 126699484

GI number: 126699484

Start: 2173415

End: 2174311

Strand: Direct

Name: yccM [C]

Synonym: CD1872

Alternate gene names: 126699484

Gene position: 2173415-2174311 (Clockwise)

Preceding gene: 126699483

Following gene: 126699485

Centisome position: 50.66

GC content: 29.21

Gene sequence:

>897_bases
TTGGAATTGGATAGAATTAAAAATATTATAAATGGTAGTACAAAAAAAGATAAATATAAAATAAGAGATCGTTTTAGGCA
TTTATTTCAATCCGTTTGGTTTTTAATTACTAATTCTTACTTTGAAGGGTTTAAGACTGGTAAAATCTACGGTGGGAATT
TAAAGAAAATTTGTGTTCCAGGTATGAATTGTTATTCATGCCCGGGAGCAAAAGGTTCTTGTCCAATAGGATCACTACAG
GCAGTAATTGGAAATTCAAAATATAAGATTAGTTATTATATAGTTGGGATTTTGTTTTTTATAGGAGCATTGGTGGGAAG
ATTTGTTTGTGGATGGCTGTGTCCATTTGGATTGATTCAAGATTTGCTACACAAGATTCCCTTTTTTAAAAAAGTTGAAA
CATTTAAGTTTGATAAACATTTGAGAAAATTGAAATACATAATATTACTTGTATTTGTAATAATATTACCTTTATTTTTG
GTTGATATTTTAGGTCAGGGTTCTCCGTATTTTTGTAAACTTATTTGTCCGATTGGTATGCTGGAAGGAGGATTACCACT
TGTTTTATTAAATAAAAGTATGAGAAGTGCGATAGGTTTCTTGTATTATTGGAAAGGAATCATTCTAATAGTTACTTTGT
TACTTTCTATAATTATATATAGACCTTTTTGTAAATATATATGTCCACTTGGAGCTATTTACTCAATTTTTAACCCTATT
TCAATATTTAGATATAGATTGGATAAGGATAAGTGTATTAATTGTGGAAAATGTAAAAAAGTTTGCCAAATGAATATAGA
TCCAGTTGAGAATTGCAATCATCTGGAGTGTATCAGATGTGGACGATGTAAAAATGCTTGTCCAGTGGATGCAATTAGTT
ATGGAGTAAGAAAATAG

Upstream 100 bases:

>100_bases
TTAATTATCTTTATTAGTATGGCGATGATTTACTATGGTCATAGTAATGGAGAAACTAAAGTTGTCTTGGATAAGGCGAT
AAGAATTTGTATGGAGTGTA

Downstream 100 bases:

>100_bases
AGAGGAGTAGTTAGGAAAGTGATAAAAAATGCTATAGCATATATTACAAGAAAGAGAAATAGAACTTTAATAATTTTTAT
CATATTAACTATAGTTCTTT

Product: iron-sulfur-binding membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MELDRIKNIINGSTKKDKYKIRDRFRHLFQSVWFLITNSYFEGFKTGKIYGGNLKKICVPGMNCYSCPGAKGSCPIGSLQ
AVIGNSKYKISYYIVGILFFIGALVGRFVCGWLCPFGLIQDLLHKIPFFKKVETFKFDKHLRKLKYIILLVFVIILPLFL
VDILGQGSPYFCKLICPIGMLEGGLPLVLLNKSMRSAIGFLYYWKGIILIVTLLLSIIIYRPFCKYICPLGAIYSIFNPI
SIFRYRLDKDKCINCGKCKKVCQMNIDPVENCNHLECIRCGRCKNACPVDAISYGVRK

Sequences:

>Translated_298_residues
MELDRIKNIINGSTKKDKYKIRDRFRHLFQSVWFLITNSYFEGFKTGKIYGGNLKKICVPGMNCYSCPGAKGSCPIGSLQ
AVIGNSKYKISYYIVGILFFIGALVGRFVCGWLCPFGLIQDLLHKIPFFKKVETFKFDKHLRKLKYIILLVFVIILPLFL
VDILGQGSPYFCKLICPIGMLEGGLPLVLLNKSMRSAIGFLYYWKGIILIVTLLLSIIIYRPFCKYICPLGAIYSIFNPI
SIFRYRLDKDKCINCGKCKKVCQMNIDPVENCNHLECIRCGRCKNACPVDAISYGVRK
>Mature_298_residues
MELDRIKNIINGSTKKDKYKIRDRFRHLFQSVWFLITNSYFEGFKTGKIYGGNLKKICVPGMNCYSCPGAKGSCPIGSLQ
AVIGNSKYKISYYIVGILFFIGALVGRFVCGWLCPFGLIQDLLHKIPFFKKVETFKFDKHLRKLKYIILLVFVIILPLFL
VDILGQGSPYFCKLICPIGMLEGGLPLVLLNKSMRSAIGFLYYWKGIILIVTLLLSIIIYRPFCKYICPLGAIYSIFNPI
SIFRYRLDKDKCINCGKCKKVCQMNIDPVENCNHLECIRCGRCKNACPVDAISYGVRK

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=248, Percent_Identity=28.2258064516129, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33994; Mature: 33994

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDRIKNIINGSTKKDKYKIRDRFRHLFQSVWFLITNSYFEGFKTGKIYGGNLKKICVP
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEECC
GMNCYSCPGAKGSCPIGSLQAVIGNSKYKISYYIVGILFFIGALVGRFVCGWLCPFGLIQ
CCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLHKIPFFKKVETFKFDKHLRKLKYIILLVFVIILPLFLVDILGQGSPYFCKLICPIGM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEGGLPLVLLNKSMRSAIGFLYYWKGIILIVTLLLSIIIYRPFCKYICPLGAIYSIFNPI
HCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFRYRLDKDKCINCGKCKKVCQMNIDPVENCNHLECIRCGRCKNACPVDAISYGVRK
HHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MELDRIKNIINGSTKKDKYKIRDRFRHLFQSVWFLITNSYFEGFKTGKIYGGNLKKICVP
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEECC
GMNCYSCPGAKGSCPIGSLQAVIGNSKYKISYYIVGILFFIGALVGRFVCGWLCPFGLIQ
CCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLHKIPFFKKVETFKFDKHLRKLKYIILLVFVIILPLFLVDILGQGSPYFCKLICPIGM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEGGLPLVLLNKSMRSAIGFLYYWKGIILIVTLLLSIIIYRPFCKYICPLGAIYSIFNPI
HCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFRYRLDKDKCINCGKCKKVCQMNIDPVENCNHLECIRCGRCKNACPVDAISYGVRK
HHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]