| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699479
Identifier: 126699479
GI number: 126699479
Start: 2169244
End: 2170050
Strand: Direct
Name: 126699479
Synonym: CD1868
Alternate gene names: NA
Gene position: 2169244-2170050 (Clockwise)
Preceding gene: 126699478
Following gene: 126699482
Centisome position: 50.56
GC content: 30.11
Gene sequence:
>807_bases ATGGAGATTAGTAAAAAAGAACTTAGAAAAATCAGTAGAAAATTTAGGACATTAGCTTCAAATGTTATGAATTCATATTA TGGAGAACAGAATGCAAATTTGGAAGAAATGATAAATTATATAGAGCAAACATCGTTGATAAAAGAGTATTTGCATAGTT TAGAATATGATGTTGATGGCTTAGATGACTTATTAAATACGATAAGTAATTCTTATGGACGTAAAGTTTTGAATCTTGGC AATGATAGTAATAAAAGGACGTATCTACTGTATAGAGCATTTTCCTTTATAACAGGAAATAATCTACCTACATATACTTT TGGCTGGTATTATGCTGGCAGTAATAAATATCAAGATATGGCAAAGGCGTTTGGCGATAGAATGGTCTATCCGTTTGTAC TTGAGGTTGAAAATTATATGAAAGATATTTCTACCGATATGGGGTACGATGAAAATAATGCTCTATATAATATCAATGTT AATAGTTCTGGAGTTCAAGTCAATATTGCGGAACACGGAAGCACGATTAACGCTGACCAAGAAAATAAATTTAATACTGA AGAAGTAATCAAGGCAATTAACAGTGTAGAAGACTTAATTAAAGGTATGGAGGATGATAACTCCAAATCAATACTTAATC AGAATTTAGATAATATAAAAAATGAAATTAAGCAGAAGCATCCGAAGAAAGAAGTATTGACTACTTGTTTAAAAAGTATG CATTTTATCACTACTTCCGTAGCTTTAATTCCTGATTTAGCTTTAGGTATAAAAATGCTTGCATCATTGATAGGCATTTC AATTTAA
Upstream 100 bases:
>100_bases TATGAAGAAAAGAAATATTTGTGTTGTGGCAAAACCGCTAGAATAAGTAGTATAAAAAAATTAGAAGGTAGTTATTGCCC GTTTTGTGGAGAGATGATAG
Downstream 100 bases:
>100_bases TATTATAAAAATAAGAAAGCTATATAATATTAGAGTTATCGTTCCATCTCCTTACCCATGTAAATTCCATAGTTCTTTCG TATTTGATAAAGCTCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDGLDDLLNTISNSYGRKVLNLG NDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDMAKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINV NSSGVQVNIAEHGSTINADQENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM HFITTSVALIPDLALGIKMLASLIGISI
Sequences:
>Translated_268_residues MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDGLDDLLNTISNSYGRKVLNLG NDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDMAKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINV NSSGVQVNIAEHGSTINADQENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM HFITTSVALIPDLALGIKMLASLIGISI >Mature_268_residues MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDGLDDLLNTISNSYGRKVLNLG NDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDMAKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINV NSSGVQVNIAEHGSTINADQENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM HFITTSVALIPDLALGIKMLASLIGISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30518; Mature: 30518
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LDDLLNTISNSYGRKVLNLGNDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDM HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH AKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINVNSSGVQVNIAEHGSTINADQ HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCC ENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HFITTSVALIPDLALGIKMLASLIGISI HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEISKKELRKISRKFRTLASNVMNSYYGEQNANLEEMINYIEQTSLIKEYLHSLEYDVDG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LDDLLNTISNSYGRKVLNLGNDSNKRTYLLYRAFSFITGNNLPTYTFGWYYAGSNKYQDM HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH AKAFGDRMVYPFVLEVENYMKDISTDMGYDENNALYNINVNSSGVQVNIAEHGSTINADQ HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCC ENKFNTEEVIKAINSVEDLIKGMEDDNSKSILNQNLDNIKNEIKQKHPKKEVLTTCLKSM CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HFITTSVALIPDLALGIKMLASLIGISI HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA