Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699478

Identifier: 126699478

GI number: 126699478

Start: 2168793

End: 2169254

Strand: Direct

Name: 126699478

Synonym: CD1867

Alternate gene names: NA

Gene position: 2168793-2169254 (Clockwise)

Preceding gene: 126699477

Following gene: 126699479

Centisome position: 50.55

GC content: 31.17

Gene sequence:

>462_bases
ATGGCTAATGATATAAAATTTGAAATTTCTGTTCCAGCGGATGAAGAGGGATATGTTCAATTAAAATGTCCAAGTTGTAG
TGAAAAATTTATGTTAACGGTGGAAGATATTGAGGCTGAAAGCACAATAGATATTTGGTGTCCTAATTGTGGTTTAACAC
ACGAGAATTATTTAGACGATGATATTTATGAATTAGCAGAACGAATAGTTGAAAATCAAGTTGCTGAAATGCTAAATGAT
TTTTCAAAGAATCTTGAAAAAAGTTTTAGGAATAGTAAAAGTATAAAGTTTAAACGTGGAAAAGAGATTAAAAAGGAAGC
AGAACTTCCGATAGGAAGAAAAACTGGAGATTATGAAGAAAAGAAATATTTGTGTTGTGGCAAAACCGCTAGAATAAGTA
GTATAAAAAAATTAGAAGGTAGTTATTGCCCGTTTTGTGGAGAGATGATAGATGGAGATTAG

Upstream 100 bases:

>100_bases
ACGTGCTGAGAATAGTGTTGTTATTGTACGTAAAGATGCACGACCTTGTAGTCTACCAGTGGTGAAATTATAACTTTTAT
TGTGAGGAGATGAAATTTAA

Downstream 100 bases:

>100_bases
TAAAAAAGAACTTAGAAAAATCAGTAGAAAATTTAGGACATTAGCTTCAAATGTTATGAATTCATATTATGGAGAACAGA
ATGCAAATTTGGAAGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MANDIKFEISVPADEEGYVQLKCPSCSEKFMLTVEDIEAESTIDIWCPNCGLTHENYLDDDIYELAERIVENQVAEMLND
FSKNLEKSFRNSKSIKFKRGKEIKKEAELPIGRKTGDYEEKKYLCCGKTARISSIKKLEGSYCPFCGEMIDGD

Sequences:

>Translated_153_residues
MANDIKFEISVPADEEGYVQLKCPSCSEKFMLTVEDIEAESTIDIWCPNCGLTHENYLDDDIYELAERIVENQVAEMLND
FSKNLEKSFRNSKSIKFKRGKEIKKEAELPIGRKTGDYEEKKYLCCGKTARISSIKKLEGSYCPFCGEMIDGD
>Mature_152_residues
ANDIKFEISVPADEEGYVQLKCPSCSEKFMLTVEDIEAESTIDIWCPNCGLTHENYLDDDIYELAERIVENQVAEMLNDF
SKNLEKSFRNSKSIKFKRGKEIKKEAELPIGRKTGDYEEKKYLCCGKTARISSIKKLEGSYCPFCGEMIDGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17475; Mature: 17344

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDIKFEISVPADEEGYVQLKCPSCSEKFMLTVEDIEAESTIDIWCPNCGLTHENYLDD
CCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCH
DIYELAERIVENQVAEMLNDFSKNLEKSFRNSKSIKFKRGKEIKKEAELPIGRKTGDYEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCCCCCCC
KKYLCCGKTARISSIKKLEGSYCPFCGEMIDGD
CEEEECCCCHHHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure 
ANDIKFEISVPADEEGYVQLKCPSCSEKFMLTVEDIEAESTIDIWCPNCGLTHENYLDD
CCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCH
DIYELAERIVENQVAEMLNDFSKNLEKSFRNSKSIKFKRGKEIKKEAELPIGRKTGDYEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCCCCCCC
KKYLCCGKTARISSIKKLEGSYCPFCGEMIDGD
CEEEECCCCHHHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA