| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yhcG [H]
Identifier: 126699471
GI number: 126699471
Start: 2153747
End: 2154793
Strand: Direct
Name: yhcG [H]
Synonym: CD1860
Alternate gene names: 126699471
Gene position: 2153747-2154793 (Clockwise)
Preceding gene: 126699470
Following gene: 126699472
Centisome position: 50.2
GC content: 31.23
Gene sequence:
>1047_bases ATGAATAAAGAAAAGAATTCTTTACAAAATATAAACATAGAAAAAAACAACAATTCATTTGAAGAAATTGTTATGATTGT AGAAAATGCAAAGGATCGTGCATATAGAAAAGTTAATGAAGAGCTAATCTTAATGTATCAAGAGGTTGGGAAATATATTA GTGAAAAAACAAAGGAAGCATCTTATGGTTCAGGATTCGTAGATAATGTAGCTGAATTTTTTTCTATTAACTATCCTGAT TTAAAAGGATTTAATCGCAGAGGCCTTTATAGAATGAAGCAATTTTACGAACTGTACAAAGATGATGAAAAAGTGTCAAC GCTGTTGACACAATTGAGTTGGTCTAATCATTTAAAAATAATGTCGGGAGCTAAAAGTAGAGAAGAGAGAGAATTTTATA TTAACTTAGCAATTAAGGAAAATTTGACACATCGAGAGCTGGTAAGACAGATGGATAGTGGATACTATGAACGCTGTATG CTTTCAAATGAGGGAAATATGCCTGCAATACAAAGAGCGAAACAGGAAACACATAATTTGTTTATGGATAGCTATGTATT AGAATTTCTTGATGCTCCTAAAATTGGAAATGAAAGAGACTTTCAGAAGTCAATTCTTGAAAATTTGAAGAACTTTGTTT TAGAAATTGGAAAAGATTTTTCTTTTATAGGTAATGAGTATAGAGTGCAGGTTGGAAATCATGACTACTATATTGATTTA TTATTTTACCATAGAGGTTTATCCTGCTTGGTTGCTTTTGAACTTAAAATCGGAGAATTTAAGCCGGAATATGTTGGTAA AATGAACCTATATCTAGAAGCTTTAGATAGAGAAGTTAAGAAACAAGCGGAAAACCCAAGTGTTGGAGTTATTCTTTGTG CATCAAAAGATGATGAAGTAGTTGAGTTTGCACTAAGCAGAAGCCTTTCGCCAACAATGGTATCTGAATATAGATTAAAA TTGATAGATAAAGAACTATTACAAAGAAAGTTAAAAGAGTATACAGGAATTGCAGAGCAGGAGATAGAAAGACATGATGA AAAATAG
Upstream 100 bases:
>100_bases TGAAGGGAAAATACAAATTGTTAATTCAAAAACTTTTATAGAGAAAAATATACAGGGCAGGAAATAAATTATAGATGTCA GATGCAGATAGGAGGAATTT
Downstream 100 bases:
>100_bases ATAAATATAACTTTGTGCATCAAAAAATGAGTGAAGTAGTCCATGTGGAAACAATAATAAAATAAAAGTGTTTCAATTTA GTAATATACTATGAAAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNKEKNSLQNINIEKNNNSFEEIVMIVENAKDRAYRKVNEELILMYQEVGKYISEKTKEASYGSGFVDNVAEFFSINYPD LKGFNRRGLYRMKQFYELYKDDEKVSTLLTQLSWSNHLKIMSGAKSREEREFYINLAIKENLTHRELVRQMDSGYYERCM LSNEGNMPAIQRAKQETHNLFMDSYVLEFLDAPKIGNERDFQKSILENLKNFVLEIGKDFSFIGNEYRVQVGNHDYYIDL LFYHRGLSCLVAFELKIGEFKPEYVGKMNLYLEALDREVKKQAENPSVGVILCASKDDEVVEFALSRSLSPTMVSEYRLK LIDKELLQRKLKEYTGIAEQEIERHDEK
Sequences:
>Translated_348_residues MNKEKNSLQNINIEKNNNSFEEIVMIVENAKDRAYRKVNEELILMYQEVGKYISEKTKEASYGSGFVDNVAEFFSINYPD LKGFNRRGLYRMKQFYELYKDDEKVSTLLTQLSWSNHLKIMSGAKSREEREFYINLAIKENLTHRELVRQMDSGYYERCM LSNEGNMPAIQRAKQETHNLFMDSYVLEFLDAPKIGNERDFQKSILENLKNFVLEIGKDFSFIGNEYRVQVGNHDYYIDL LFYHRGLSCLVAFELKIGEFKPEYVGKMNLYLEALDREVKKQAENPSVGVILCASKDDEVVEFALSRSLSPTMVSEYRLK LIDKELLQRKLKEYTGIAEQEIERHDEK >Mature_348_residues MNKEKNSLQNINIEKNNNSFEEIVMIVENAKDRAYRKVNEELILMYQEVGKYISEKTKEASYGSGFVDNVAEFFSINYPD LKGFNRRGLYRMKQFYELYKDDEKVSTLLTQLSWSNHLKIMSGAKSREEREFYINLAIKENLTHRELVRQMDSGYYERCM LSNEGNMPAIQRAKQETHNLFMDSYVLEFLDAPKIGNERDFQKSILENLKNFVLEIGKDFSFIGNEYRVQVGNHDYYIDL LFYHRGLSCLVAFELKIGEFKPEYVGKMNLYLEALDREVKKQAENPSVGVILCASKDDEVVEFALSRSLSPTMVSEYRLK LIDKELLQRKLKEYTGIAEQEIERHDEK
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=359, Percent_Identity=28.6908077994429, Blast_Score=167, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 40889; Mature: 40889
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEKNSLQNINIEKNNNSFEEIVMIVENAKDRAYRKVNEELILMYQEVGKYISEKTKEA CCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYGSGFVDNVAEFFSINYPDLKGFNRRGLYRMKQFYELYKDDEKVSTLLTQLSWSNHLKI CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE MSGAKSREEREFYINLAIKENLTHRELVRQMDSGYYERCMLSNEGNMPAIQRAKQETHNL ECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHEECCCCCCHHHHHHHHHHHHH FMDSYVLEFLDAPKIGNERDFQKSILENLKNFVLEIGKDFSFIGNEYRVQVGNHDYYIDL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCEEEEE LFYHRGLSCLVAFELKIGEFKPEYVGKMNLYLEALDREVKKQAENPSVGVILCASKDDEV HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH VEFALSRSLSPTMVSEYRLKLIDKELLQRKLKEYTGIAEQEIERHDEK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC >Mature Secondary Structure MNKEKNSLQNINIEKNNNSFEEIVMIVENAKDRAYRKVNEELILMYQEVGKYISEKTKEA CCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYGSGFVDNVAEFFSINYPDLKGFNRRGLYRMKQFYELYKDDEKVSTLLTQLSWSNHLKI CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE MSGAKSREEREFYINLAIKENLTHRELVRQMDSGYYERCMLSNEGNMPAIQRAKQETHNL ECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHEECCCCCCHHHHHHHHHHHHH FMDSYVLEFLDAPKIGNERDFQKSILENLKNFVLEIGKDFSFIGNEYRVQVGNHDYYIDL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCEEEEE LFYHRGLSCLVAFELKIGEFKPEYVGKMNLYLEALDREVKKQAENPSVGVILCASKDDEV HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH VEFALSRSLSPTMVSEYRLKLIDKELLQRKLKEYTGIAEQEIERHDEK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]