Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699470

Identifier: 126699470

GI number: 126699470

Start: 2153528

End: 2153713

Strand: Direct

Name: 126699470

Synonym: CD1859A

Alternate gene names: NA

Gene position: 2153528-2153713 (Clockwise)

Preceding gene: 126699469

Following gene: 126699471

Centisome position: 50.2

GC content: 28.49

Gene sequence:

>186_bases
ATGTCGGAAGTATTTATGAATAATGCAAAGGTTATGGCAAAGGGACAGGTTACTATTCCAAAGAAAATAAGAGAAATATT
AGAAATTGAGAATGGAGATTATGTAACTTTTGTTGTAACTGAAGGGAAAATACAAATTGTTAATTCAAAAACTTTTATAG
AGAAAAATATACAGGGCAGGAAATAA

Upstream 100 bases:

>100_bases
CAACTTATAGCAAGTAAGATAGCACTAATTTTAACATCGAAAAAATGTCCTAAAAATGCTATAATTTTTGTAGGGAAAGT
AGGAAATATGGAGGTGTTTT

Downstream 100 bases:

>100_bases
ATTATAGATGTCAGATGCAGATAGGAGGAATTTATGAATAAAGAAAAGAATTCTTTACAAAATATAAACATAGAAAAAAA
CAACAATTCATTTGAAGAAA

Product: conjugative transposon regulatory protein

Products: NA

Alternate protein names: Conjugative Transposon Regulatory Protein

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MSEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGRK

Sequences:

>Translated_61_residues
MSEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGRK
>Mature_60_residues
SEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6957; Mature: 6826

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGR
CCCCCCCCCEEEEECCEECHHHHHHHHCCCCCCEEEEEEECCEEEEEECCEEEECCCCCC
K
C
>Mature Secondary Structure 
SEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGR
CCCCCCCCEEEEECCEECHHHHHHHHCCCCCCEEEEEEECCEEEEEECCEEEECCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA