| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699470
Identifier: 126699470
GI number: 126699470
Start: 2153528
End: 2153713
Strand: Direct
Name: 126699470
Synonym: CD1859A
Alternate gene names: NA
Gene position: 2153528-2153713 (Clockwise)
Preceding gene: 126699469
Following gene: 126699471
Centisome position: 50.2
GC content: 28.49
Gene sequence:
>186_bases ATGTCGGAAGTATTTATGAATAATGCAAAGGTTATGGCAAAGGGACAGGTTACTATTCCAAAGAAAATAAGAGAAATATT AGAAATTGAGAATGGAGATTATGTAACTTTTGTTGTAACTGAAGGGAAAATACAAATTGTTAATTCAAAAACTTTTATAG AGAAAAATATACAGGGCAGGAAATAA
Upstream 100 bases:
>100_bases CAACTTATAGCAAGTAAGATAGCACTAATTTTAACATCGAAAAAATGTCCTAAAAATGCTATAATTTTTGTAGGGAAAGT AGGAAATATGGAGGTGTTTT
Downstream 100 bases:
>100_bases ATTATAGATGTCAGATGCAGATAGGAGGAATTTATGAATAAAGAAAAGAATTCTTTACAAAATATAAACATAGAAAAAAA CAACAATTCATTTGAAGAAA
Product: conjugative transposon regulatory protein
Products: NA
Alternate protein names: Conjugative Transposon Regulatory Protein
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGRK
Sequences:
>Translated_61_residues MSEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGRK >Mature_60_residues SEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6957; Mature: 6826
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGR CCCCCCCCCEEEEECCEECHHHHHHHHCCCCCCEEEEEEECCEEEEEECCEEEECCCCCC K C >Mature Secondary Structure SEVFMNNAKVMAKGQVTIPKKIREILEIENGDYVTFVVTEGKIQIVNSKTFIEKNIQGR CCCCCCCCEEEEECCEECHHHHHHHHCCCCCCEEEEEEECCEEEEEECCEEEECCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA