Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699468

Identifier: 126699468

GI number: 126699468

Start: 2150071

End: 2151642

Strand: Direct

Name: 126699468

Synonym: CD1858

Alternate gene names: NA

Gene position: 2150071-2151642 (Clockwise)

Preceding gene: 126699467

Following gene: 126699469

Centisome position: 50.12

GC content: 34.99

Gene sequence:

>1572_bases
ATGAAGAATAAAAAGGCTGCGGGAGTAATTCTTGGAGCAGTGCTTTTGATAGTGGGAGTAGTAATCTCTTTATTTGCAGG
TAGTAAGATTGTATTTGCACAAGGAGGGTTGTTTACGACACTTGTAAATCCGATAGAAGCCGTTGCTCAAATAAAAGTAG
AAGTAGAAGTTAATGTTAAGTATATTTTTGAAGATGAAAAAGTCTTTAAGGAGGAAAAGATTAAGGCTGAAAAGGGGCGG
CTTCTTGACAGTGGAGATCTTCCAATAATTCCTGATGATATGAAATTTATAGATGACTTTCTATTTTATGAAGTAAAGGG
AGACGGGAAAGATGAAATTATCCGTAAAGTTACAAAGATTGATGTTAAGGATAAGGAAACGCAAACAGAAAATGAAAGCT
CAAAATCTGAGCAAAGCTCTCAATCAAATGCTTCAAAGATAGAAAATAAGGGAACTCAAACAGAGCTTAGCAAAGATGAT
ATTTCTAAAATGGAAAAGGAGTCTAAGGAACTTAAAGAAAAACTTGATAAGCTAAATCAGGAGATTAAGGACAAGGATAA
ACTAAGCGAGAAGCAAAAGGATAAAATCAAAGACCTTGAGGAGAAAATAGATAAACTGAAGGAAAAACTTGAAAAGGGCA
AAGATGATAAGGACTTATCAGCAGATATGAAAAAGGAGATAGACAAGCTAACTGATAAGATTAAGGAACTTGAGAAAAAG
GCTAATGAGGTCGGTAGAGCTCCTGTTATGCATAATCCTACTGTAACACCAATTAGCCCTATTTCCGGAATTAAACAAGG
AACAGGAAATGTATCACCACAAACATCTATAAATAGCAGTGGTAAAGGTTCTGCCACGCAGGAAAGTAAAGGGGCAAATA
CAAAAGATACAAACAGCAATGAATCAAAGGAGAAAGAAAAGCAAGTTTGTTATCCAAATAAGCTGACACCAAAACAGCCT
GCTAATAATGGTAGTCATGATTCTTCTCTGGATGGTTCAAGTAAGAATATAAATACCAACAAAGGAGTTGCTTCAGAACC
TTCAAAGGCACGAGGAACAGTTACTGAAAATAAGGATAATGCAAACAAAAATTATCCTATTCACCATAATGACAGTAAAG
ATAATAAAGAAACGGATAAATATTCTGCTGATGCAAGACAGTTTGTTACCTTTACAACTAAAAATGGTAAGACCTTTCAT
TTAATCATTAACCATGATGAGGATAGCGAGAAGGTTATGCTCCTAACTGAAGTATCTGAAGATGATCTCTTAAATATGGT
AGAAAAGAAAGCACCGGAGAAAGAGATTGTTAAAGAAGAATCACAAAAAGAAGAGCCTAAACAAGTGAAAAAAGAAGAAA
GCAGTAATACAGGAACCTACTTAATTCTCATTCTTGTAGTAGCGGGAGCCTTAGGTGCAGGATATTATTTTAAGGTTATT
AAGAAAAAAGAAGATAAGGAGCTTGAAGGCTTTGAGGAGGAAGATGATGATTTCTTTTCAGAGGCAGAAGAAAGCGAAAA
TGAAGTAAACGAAGCAGTAACAGAAGATAAAGAAGATGATGAGATAGAGTAA

Upstream 100 bases:

>100_bases
ATTGCCATTTGCAGAAAAAATAACATTACAATTTCTGATCTTATGGTAAAAGTAAACAGAGAAAAATCAGAAATGAAAAA
GGAGAACGGAAATGAAAAAA

Downstream 100 bases:

>100_bases
ACTTGTACCCAAAATTATATAATATTTGGGGCAAAACACAGGGCGAGAGAGTAAAATCTTTCGCCCTCTTATATTGAAAA
CAGGAGGAAAACTATATGAA

Product: cell surface protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKNKKAAGVILGAVLLIVGVVISLFAGSKIVFAQGGLFTTLVNPIEAVAQIKVEVEVNVKYIFEDEKVFKEEKIKAEKGR
LLDSGDLPIIPDDMKFIDDFLFYEVKGDGKDEIIRKVTKIDVKDKETQTENESSKSEQSSQSNASKIENKGTQTELSKDD
ISKMEKESKELKEKLDKLNQEIKDKDKLSEKQKDKIKDLEEKIDKLKEKLEKGKDDKDLSADMKKEIDKLTDKIKELEKK
ANEVGRAPVMHNPTVTPISPISGIKQGTGNVSPQTSINSSGKGSATQESKGANTKDTNSNESKEKEKQVCYPNKLTPKQP
ANNGSHDSSLDGSSKNINTNKGVASEPSKARGTVTENKDNANKNYPIHHNDSKDNKETDKYSADARQFVTFTTKNGKTFH
LIINHDEDSEKVMLLTEVSEDDLLNMVEKKAPEKEIVKEESQKEEPKQVKKEESSNTGTYLILILVVAGALGAGYYFKVI
KKKEDKELEGFEEEDDDFFSEAEESENEVNEAVTEDKEDDEIE

Sequences:

>Translated_523_residues
MKNKKAAGVILGAVLLIVGVVISLFAGSKIVFAQGGLFTTLVNPIEAVAQIKVEVEVNVKYIFEDEKVFKEEKIKAEKGR
LLDSGDLPIIPDDMKFIDDFLFYEVKGDGKDEIIRKVTKIDVKDKETQTENESSKSEQSSQSNASKIENKGTQTELSKDD
ISKMEKESKELKEKLDKLNQEIKDKDKLSEKQKDKIKDLEEKIDKLKEKLEKGKDDKDLSADMKKEIDKLTDKIKELEKK
ANEVGRAPVMHNPTVTPISPISGIKQGTGNVSPQTSINSSGKGSATQESKGANTKDTNSNESKEKEKQVCYPNKLTPKQP
ANNGSHDSSLDGSSKNINTNKGVASEPSKARGTVTENKDNANKNYPIHHNDSKDNKETDKYSADARQFVTFTTKNGKTFH
LIINHDEDSEKVMLLTEVSEDDLLNMVEKKAPEKEIVKEESQKEEPKQVKKEESSNTGTYLILILVVAGALGAGYYFKVI
KKKEDKELEGFEEEDDDFFSEAEESENEVNEAVTEDKEDDEIE
>Mature_523_residues
MKNKKAAGVILGAVLLIVGVVISLFAGSKIVFAQGGLFTTLVNPIEAVAQIKVEVEVNVKYIFEDEKVFKEEKIKAEKGR
LLDSGDLPIIPDDMKFIDDFLFYEVKGDGKDEIIRKVTKIDVKDKETQTENESSKSEQSSQSNASKIENKGTQTELSKDD
ISKMEKESKELKEKLDKLNQEIKDKDKLSEKQKDKIKDLEEKIDKLKEKLEKGKDDKDLSADMKKEIDKLTDKIKELEKK
ANEVGRAPVMHNPTVTPISPISGIKQGTGNVSPQTSINSSGKGSATQESKGANTKDTNSNESKEKEKQVCYPNKLTPKQP
ANNGSHDSSLDGSSKNINTNKGVASEPSKARGTVTENKDNANKNYPIHHNDSKDNKETDKYSADARQFVTFTTKNGKTFH
LIINHDEDSEKVMLLTEVSEDDLLNMVEKKAPEKEIVKEESQKEEPKQVKKEESSNTGTYLILILVVAGALGAGYYFKVI
KKKEDKELEGFEEEDDDFFSEAEESENEVNEAVTEDKEDDEIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58395; Mature: 58395

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKAAGVILGAVLLIVGVVISLFAGSKIVFAQGGLFTTLVNPIEAVAQIKVEVEVNVK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHEEEEEEEEEEE
YIFEDEKVFKEEKIKAEKGRLLDSGDLPIIPDDMKFIDDFLFYEVKGDGKDEIIRKVTKI
EEECCHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHC
DVKDKETQTENESSKSEQSSQSNASKIENKGTQTELSKDDISKMEKESKELKEKLDKLNQ
CCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIKDKDKLSEKQKDKIKDLEEKIDKLKEKLEKGKDDKDLSADMKKEIDKLTDKIKELEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ANEVGRAPVMHNPTVTPISPISGIKQGTGNVSPQTSINSSGKGSATQESKGANTKDTNSN
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ESKEKEKQVCYPNKLTPKQPANNGSHDSSLDGSSKNINTNKGVASEPSKARGTVTENKDN
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ANKNYPIHHNDSKDNKETDKYSADARQFVTFTTKNGKTFHLIINHDEDSEKVMLLTEVSE
CCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCH
DDLLNMVEKKAPEKEIVKEESQKEEPKQVKKEESSNTGTYLILILVVAGALGAGYYFKVI
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
KKKEDKELEGFEEEDDDFFSEAEESENEVNEAVTEDKEDDEIE
HCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKNKKAAGVILGAVLLIVGVVISLFAGSKIVFAQGGLFTTLVNPIEAVAQIKVEVEVNVK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHEEEEEEEEEEE
YIFEDEKVFKEEKIKAEKGRLLDSGDLPIIPDDMKFIDDFLFYEVKGDGKDEIIRKVTKI
EEECCHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHC
DVKDKETQTENESSKSEQSSQSNASKIENKGTQTELSKDDISKMEKESKELKEKLDKLNQ
CCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIKDKDKLSEKQKDKIKDLEEKIDKLKEKLEKGKDDKDLSADMKKEIDKLTDKIKELEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ANEVGRAPVMHNPTVTPISPISGIKQGTGNVSPQTSINSSGKGSATQESKGANTKDTNSN
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ESKEKEKQVCYPNKLTPKQPANNGSHDSSLDGSSKNINTNKGVASEPSKARGTVTENKDN
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ANKNYPIHHNDSKDNKETDKYSADARQFVTFTTKNGKTFHLIINHDEDSEKVMLLTEVSE
CCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCH
DDLLNMVEKKAPEKEIVKEESQKEEPKQVKKEESSNTGTYLILILVVAGALGAGYYFKVI
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
KKKEDKELEGFEEEDDDFFSEAEESENEVNEAVTEDKEDDEIE
HCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA