The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699451

Identifier: 126699451

GI number: 126699451

Start: 2134424

End: 2135170

Strand: Direct

Name: 126699451

Synonym: CD1842

Alternate gene names: NA

Gene position: 2134424-2135170 (Clockwise)

Preceding gene: 126699450

Following gene: 126699453

Centisome position: 49.75

GC content: 24.9

Gene sequence:

>747_bases
ATGTTAAATAGTATAACTTTGATACTTGGTATAATATTTACAATTTACTATTTTTATCTCAAAATAGTTTTTGGAGGAAT
TTCATTTAGTGAGATTTTCTTAGTTGTAGGAATTGTACTAATTATCTATCAAATATTTAAGAAAAAAATTAAAGAAAAGA
AGGTTTTTTATAGGGTGTTAAAAATAATAATCAGCATTTTTTTAATAGTATTTGTAGTTACTGAGAGTCTAATTATTTTT
TATCCCAAAAATAGTTTAGAATCAAAAAGTGATTATCTCTTAATTTTAGGAGCTTCTGTAAAAAAGACTACACCAAGTAC
AACCCTGAAGGGTAGGTTAGACACTGCATTGAAATACCTAAAAATTAATGATAATTGTTATGTGGTAGTATCTGGTGGTA
AAGGAAGTGGAGAAAAAATAACTGAGGCAAAAGCTATGAAAGATTATCTTATAAAAAATGGTATAGATAAAAATAGGATA
ATAGAAGAGGATAAATCCACGAATACTTATGAGAATTTTAAATATTCAAAATTGAAGATAGAAGAACATAGTCAAAGAAA
ACTAAGCGATTTAAAAGTAAAAATAGTAACAACAGATTTTCATGTTCTCAGAAGTAAAATATTAGCATATAGAAATGGAT
ATAAAAATACGTCTTTTTATGCTAGTAAATCAAAACTTTCATTTGTACCAACTTACTATACAAGAGAATTTTTTGCATTA
TGGAAAACAATCATTTTTGATAGATAA

Upstream 100 bases:

>100_bases
TAGCAAGTTGGATTAATTGCATAGATGGAGAATACAACTGTCTTATAGAGTGTATAGATTCTTCTTTATACAAAAATAAA
TAAAAAAGGACTATGAAGAT

Downstream 100 bases:

>100_bases
TAAATAAAAAGACTAGATATAAACTCATATCTAGTCTTTTCTATTCCCTTAATTCTAATCCATTTTCCAACTTTACTTGT
TGTAGAAATTTCAATATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLNSITLILGIIFTIYYFYLKIVFGGISFSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIVFVVTESLIIF
YPKNSLESKSDYLLILGASVKKTTPSTTLKGRLDTALKYLKINDNCYVVVSGGKGSGEKITEAKAMKDYLIKNGIDKNRI
IEEDKSTNTYENFKYSKLKIEEHSQRKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYASKSKLSFVPTYYTREFFAL
WKTIIFDR

Sequences:

>Translated_248_residues
MLNSITLILGIIFTIYYFYLKIVFGGISFSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIVFVVTESLIIF
YPKNSLESKSDYLLILGASVKKTTPSTTLKGRLDTALKYLKINDNCYVVVSGGKGSGEKITEAKAMKDYLIKNGIDKNRI
IEEDKSTNTYENFKYSKLKIEEHSQRKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYASKSKLSFVPTYYTREFFAL
WKTIIFDR
>Mature_248_residues
MLNSITLILGIIFTIYYFYLKIVFGGISFSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVLKIIISIFLIVFVVTESLIIF
YPKNSLESKSDYLLILGASVKKTTPSTTLKGRLDTALKYLKINDNCYVVVSGGKGSGEKITEAKAMKDYLIKNGIDKNRI
IEEDKSTNTYENFKYSKLKIEEHSQRKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYASKSKLSFVPTYYTREFFAL
WKTIIFDR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28738; Mature: 28738

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSITLILGIIFTIYYFYLKIVFGGISFSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIISIFLIVFVVTESLIIFYPKNSLESKSDYLLILGASVKKTTPSTTLKGRLDTALKYL
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHEEEE
KINDNCYVVVSGGKGSGEKITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKLKI
EECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHCCEEEEEEE
EEHSQRKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYASKSKLSFVPTYYTREFFAL
CHHHHHHHHHCEEEEEECHHHHHHHHHHHHHCCCCCCCEEECCCCCEECCHHHHHHHHHH
WKTIIFDR
HHHHHCCC
>Mature Secondary Structure
MLNSITLILGIIFTIYYFYLKIVFGGISFSEIFLVVGIVLIIYQIFKKKIKEKKVFYRVL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIISIFLIVFVVTESLIIFYPKNSLESKSDYLLILGASVKKTTPSTTLKGRLDTALKYL
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHEEEE
KINDNCYVVVSGGKGSGEKITEAKAMKDYLIKNGIDKNRIIEEDKSTNTYENFKYSKLKI
EECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHCCEEEEEEE
EEHSQRKLSDLKVKIVTTDFHVLRSKILAYRNGYKNTSFYASKSKLSFVPTYYTREFFAL
CHHHHHHHHHCEEEEEECHHHHHHHHHHHHHCCCCCCCEEECCCCCEECCHHHHHHHHHH
WKTIIFDR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA