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The map label for this gene is tyrC [H]

Identifier: 126699448

GI number: 126699448

Start: 2128348

End: 2129187

Strand: Direct

Name: tyrC [H]

Synonym: CD1839

Alternate gene names: 126699448

Gene position: 2128348-2129187 (Clockwise)

Preceding gene: 126699447

Following gene: 126699449

Centisome position: 49.61

GC content: 25.71

Gene sequence:

>840_bases
ATGAATATTGTTATTGTAGGACTAGGAGTTATAGGAGGCTCTTTTGCTAAAGCATTAAAAAAAGCTGGATATGAAAATGT
ATTTGGAGTAGATGTAGATTTAGAAACTTTAAAAAAAGCAGAAAAAGCAAAAATCATAAAAAAAGGATGTACTACAGGTA
AAGAGTTATTTAAAAAAGCTGATTTAATTATATTATCTATATATCCTAGATTAGTTGTAGATTTTCTAAATAATAATAAA
AACTTTTTTAAAAAAGGGACTATAATTACTGATACTACAGGAATAAAAGAAACACTTATCAATGATGTGTTGCAAATTAT
TCCAGATGATATAGATTTTATATTTGGACATCCAATGGCAGGTAGGGAAAAAAAGGGTATTGATTTTGCAAGTGAACAAG
TTTTTAATGGCGCAAATTATATAATTACTCCAACTGGCAGAAACAACATAAAAAATTTAGAGTTAGTTGAAAATTTAATT
TTAGAGATTGGATTTAAAAGAGTAAAAAAGTTAACTTCACAAAAACATGATGAGATTATAGCTTTTACTTCTCAGTTACC
TCATGTTATGGCAGTTGCTCTTATAAATAGTGATGAAGAAGGTAGAGATACGGGTAAATTTATTGGAGATAGTTATAGAG
ATTTAACTAGAATTGCAAATATGAATGAAGACTTATGGAGTGAACTTTTTTTAGGAAATAGAGATAATTTACTAAAAGTT
ATAGAAAACTTTGAATCAGAAGTAAATTTAGTAAAAGAAGCTATATTTAACAATGATAAAAATAAATTAATAGAGTATTT
TAAAAAATCATCAATAAGAAGAGAAGCTTTAGAAAAATAA

Upstream 100 bases:

>100_bases
ATAAATCATTAAATAATGCTGTATATAATATTACAAATGCAGTCAGTGAAAATTTTAAATTTGACTTTAAAGAAAAATAA
TCTAGGGGGAAGTAAAAATA

Downstream 100 bases:

>100_bases
ATATTAATATTTAAGCTATATATAGATGGGTATAAATATAAGCGATAGTGTATTTAATTGTATTAATAAATATGGATTCA
ATATAATTAAATATGCTATT

Product: prephenate dehydrogenase

Products: NA

Alternate protein names: PDH [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNIVIVGLGVIGGSFAKALKKAGYENVFGVDVDLETLKKAEKAKIIKKGCTTGKELFKKADLIILSIYPRLVVDFLNNNK
NFFKKGTIITDTTGIKETLINDVLQIIPDDIDFIFGHPMAGREKKGIDFASEQVFNGANYIITPTGRNNIKNLELVENLI
LEIGFKRVKKLTSQKHDEIIAFTSQLPHVMAVALINSDEEGRDTGKFIGDSYRDLTRIANMNEDLWSELFLGNRDNLLKV
IENFESEVNLVKEAIFNNDKNKLIEYFKKSSIRREALEK

Sequences:

>Translated_279_residues
MNIVIVGLGVIGGSFAKALKKAGYENVFGVDVDLETLKKAEKAKIIKKGCTTGKELFKKADLIILSIYPRLVVDFLNNNK
NFFKKGTIITDTTGIKETLINDVLQIIPDDIDFIFGHPMAGREKKGIDFASEQVFNGANYIITPTGRNNIKNLELVENLI
LEIGFKRVKKLTSQKHDEIIAFTSQLPHVMAVALINSDEEGRDTGKFIGDSYRDLTRIANMNEDLWSELFLGNRDNLLKV
IENFESEVNLVKEAIFNNDKNKLIEYFKKSSIRREALEK
>Mature_279_residues
MNIVIVGLGVIGGSFAKALKKAGYENVFGVDVDLETLKKAEKAKIIKKGCTTGKELFKKADLIILSIYPRLVVDFLNNNK
NFFKKGTIITDTTGIKETLINDVLQIIPDDIDFIFGHPMAGREKKGIDFASEQVFNGANYIITPTGRNNIKNLELVENLI
LEIGFKRVKKLTSQKHDEIIAFTSQLPHVMAVALINSDEEGRDTGKFIGDSYRDLTRIANMNEDLWSELFLGNRDNLLKV
IENFESEVNLVKEAIFNNDKNKLIEYFKKSSIRREALEK

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF02153 PDH [H]

EC number: =1.3.1.12 [H]

Molecular weight: Translated: 31461; Mature: 31461

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVIVGLGVIGGSFAKALKKAGYENVFGVDVDLETLKKAEKAKIIKKGCTTGKELFKKA
CCEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
DLIILSIYPRLVVDFLNNNKNFFKKGTIITDTTGIKETLINDVLQIIPDDIDFIFGHPMA
CEEEEHHHHHHHHHHHHCCCCCEECCCEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCC
GREKKGIDFASEQVFNGANYIITPTGRNNIKNLELVENLILEIGFKRVKKLTSQKHDEII
CCCCCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFTSQLPHVMAVALINSDEEGRDTGKFIGDSYRDLTRIANMNEDLWSELFLGNRDNLLKV
HHHHHCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
IENFESEVNLVKEAIFNNDKNKLIEYFKKSSIRREALEK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIVIVGLGVIGGSFAKALKKAGYENVFGVDVDLETLKKAEKAKIIKKGCTTGKELFKKA
CCEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
DLIILSIYPRLVVDFLNNNKNFFKKGTIITDTTGIKETLINDVLQIIPDDIDFIFGHPMA
CEEEEHHHHHHHHHHHHCCCCCEECCCEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCC
GREKKGIDFASEQVFNGANYIITPTGRNNIKNLELVENLILEIGFKRVKKLTSQKHDEII
CCCCCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFTSQLPHVMAVALINSDEEGRDTGKFIGDSYRDLTRIANMNEDLWSELFLGNRDNLLKV
HHHHHCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
IENFESEVNLVKEAIFNNDKNKLIEYFKKSSIRREALEK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA