Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699390

Identifier: 126699390

GI number: 126699390

Start: 2062226

End: 2063614

Strand: Direct

Name: 126699390

Synonym: CD1781

Alternate gene names: NA

Gene position: 2062226-2063614 (Clockwise)

Preceding gene: 126699389

Following gene: 126699391

Centisome position: 48.07

GC content: 26.78

Gene sequence:

>1389_bases
ATGAAAGTGTTAAAGCTTATTACTGTAGTAGCCCTGATGATGTTATTTGTTACTGGATGTAATATAAAAACTGAATCTCC
AGAACAATTAGCGAAGATACCTGACTATGATGATACAAAAAAAGTATTGTATGATGGTATTGACCAGTTACTAAAACCAG
ATTCATCTATGATATTGCCTTCTAATACAAAAGAAGTAGGAAAAATAAATAAGGTAGATTTAAACAGCGATGGAATTGAT
GAATTAGTAGTATTTGAACAAAAAGAAGATTTAAGTAATAATGTGAGTCAGGTAGGGTTTGTAACCTTGAGTTACAATGG
AGAAAAATACGTACTTGGAGACCATTTTTTAGAAAATGGCGAATCAATAGAATATGCTAATTTTTATGATTTGGACTCAG
ATGGATATAAGGAAGTTATCTTATTGGTTAAATCCAAAGACAAAACGAATATGCATATATATAAAGTAGTAGATAATGAA
ATAACAAAAATATATGACTTGGATGCATCATGGCTTCAAAATAAAGAAGATTTTAATGACATGAAAGTAAAAATTGGATA
TATAGATGGAGATGACAAGTTAGACATATTGATGCTTCATTTGAATAATAAGACTAATGAAATGTTTGCAAGTGTTGCAA
ATTTTGATGGGAAAATGAAAATCAAAGATTCTGTTAAGTTTGAAAATGTAAAAAACTTAAGTGAATTATATATAACATTA
GGTAATGTTGCTTCATCTGTTGGAAATTCTTCTGCAGCTATAAAAGGTATTGTACTTGATATTCCTATATTGAAAGATAA
TAACTATATTACGCAGATACTTTATATGAAAGATGGGAAAATTAACAAAGCTTTTAGTGATTATGATAAAACTATTACTA
AATCTTATTATATACCTGTAGATGATATTGACAAAGATAAGATTATAGAAATACCTATAGTTGCAGGCAGTACAGGTAAT
AATAAAAATACTTATAGTTCTAAATCATCTGCAACTATAAGTTGGTATAGATGGAATGGAAAAGAAGGTGCTGACTCAAG
TTTAATATTTACAAGTCAGATATATTATAATTATAAATATAATTTTAAATTATTTATTCCAAATAATTTATTTGATAAAA
TACTTGTTGAACAGGAATTTGTTGGAGAAAAAGCAGTATTTAAATTTTACTATTTTGACTATTCAGACCGTAAGAATTTA
TTTAATATAGTAGTAGAGAGTAAAAATAAACTTGAAGATAGAAAAAATACAGGTACTCAAAATTCTATTGTACTTCAAGA
GAGCGATGAATATACTTTCTTACTAGTTGTAAACAATGCAAATGAAATGGATAAGCTAGATATGACTATAGACGCATTAA
AAGAATATTTCTCATTAATATATGGTTAA

Upstream 100 bases:

>100_bases
AAGTAAAACATTATGATGCCTTGAAACGTCTAATTATTGTGAGGAGATTTTTGTGAACAAATTTAAAGATTTAAAGATTT
ATAGGATTAGGAGGAGTTAA

Downstream 100 bases:

>100_bases
TATTATACTCAATTGGAGGTTTTATTTTATGAAGGAAAAGATACTTATACTAGAAGATGAAATTGGTATTAGAAGTTTTG
TTAGTATAAACTTAAAAAGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKVLKLITVVALMMLFVTGCNIKTESPEQLAKIPDYDDTKKVLYDGIDQLLKPDSSMILPSNTKEVGKINKVDLNSDGID
ELVVFEQKEDLSNNVSQVGFVTLSYNGEKYVLGDHFLENGESIEYANFYDLDSDGYKEVILLVKSKDKTNMHIYKVVDNE
ITKIYDLDASWLQNKEDFNDMKVKIGYIDGDDKLDILMLHLNNKTNEMFASVANFDGKMKIKDSVKFENVKNLSELYITL
GNVASSVGNSSAAIKGIVLDIPILKDNNYITQILYMKDGKINKAFSDYDKTITKSYYIPVDDIDKDKIIEIPIVAGSTGN
NKNTYSSKSSATISWYRWNGKEGADSSLIFTSQIYYNYKYNFKLFIPNNLFDKILVEQEFVGEKAVFKFYYFDYSDRKNL
FNIVVESKNKLEDRKNTGTQNSIVLQESDEYTFLLVVNNANEMDKLDMTIDALKEYFSLIYG

Sequences:

>Translated_462_residues
MKVLKLITVVALMMLFVTGCNIKTESPEQLAKIPDYDDTKKVLYDGIDQLLKPDSSMILPSNTKEVGKINKVDLNSDGID
ELVVFEQKEDLSNNVSQVGFVTLSYNGEKYVLGDHFLENGESIEYANFYDLDSDGYKEVILLVKSKDKTNMHIYKVVDNE
ITKIYDLDASWLQNKEDFNDMKVKIGYIDGDDKLDILMLHLNNKTNEMFASVANFDGKMKIKDSVKFENVKNLSELYITL
GNVASSVGNSSAAIKGIVLDIPILKDNNYITQILYMKDGKINKAFSDYDKTITKSYYIPVDDIDKDKIIEIPIVAGSTGN
NKNTYSSKSSATISWYRWNGKEGADSSLIFTSQIYYNYKYNFKLFIPNNLFDKILVEQEFVGEKAVFKFYYFDYSDRKNL
FNIVVESKNKLEDRKNTGTQNSIVLQESDEYTFLLVVNNANEMDKLDMTIDALKEYFSLIYG
>Mature_462_residues
MKVLKLITVVALMMLFVTGCNIKTESPEQLAKIPDYDDTKKVLYDGIDQLLKPDSSMILPSNTKEVGKINKVDLNSDGID
ELVVFEQKEDLSNNVSQVGFVTLSYNGEKYVLGDHFLENGESIEYANFYDLDSDGYKEVILLVKSKDKTNMHIYKVVDNE
ITKIYDLDASWLQNKEDFNDMKVKIGYIDGDDKLDILMLHLNNKTNEMFASVANFDGKMKIKDSVKFENVKNLSELYITL
GNVASSVGNSSAAIKGIVLDIPILKDNNYITQILYMKDGKINKAFSDYDKTITKSYYIPVDDIDKDKIIEIPIVAGSTGN
NKNTYSSKSSATISWYRWNGKEGADSSLIFTSQIYYNYKYNFKLFIPNNLFDKILVEQEFVGEKAVFKFYYFDYSDRKNL
FNIVVESKNKLEDRKNTGTQNSIVLQESDEYTFLLVVNNANEMDKLDMTIDALKEYFSLIYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52773; Mature: 52773

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKLITVVALMMLFVTGCNIKTESPEQLAKIPDYDDTKKVLYDGIDQLLKPDSSMILP
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEECC
SNTKEVGKINKVDLNSDGIDELVVFEQKEDLSNNVSQVGFVTLSYNGEKYVLGDHFLENG
CCCHHHCCEEEEECCCCCCCEEEEEECHHHHHCCCCEEEEEEEEECCCEEEECHHHHCCC
ESIEYANFYDLDSDGYKEVILLVKSKDKTNMHIYKVVDNEITKIYDLDASWLQNKEDFND
CCEEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCHHHHCCCCCCCC
MKVKIGYIDGDDKLDILMLHLNNKTNEMFASVANFDGKMKIKDSVKFENVKNLSELYITL
EEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHCHHHHHEEH
GNVASSVGNSSAAIKGIVLDIPILKDNNYITQILYMKDGKINKAFSDYDKTITKSYYIPV
HHHHHHCCCCCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHEEEEECC
DDIDKDKIIEIPIVAGSTGNNKNTYSSKSSATISWYRWNGKEGADSSLIFTSQIYYNYKY
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEE
NFKLFIPNNLFDKILVEQEFVGEKAVFKFYYFDYSDRKNLFNIVVESKNKLEDRKNTGTQ
EEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEECCCHHHHHHHCCCCC
NSIVLQESDEYTFLLVVNNANEMDKLDMTIDALKEYFSLIYG
CEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLKLITVVALMMLFVTGCNIKTESPEQLAKIPDYDDTKKVLYDGIDQLLKPDSSMILP
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEECC
SNTKEVGKINKVDLNSDGIDELVVFEQKEDLSNNVSQVGFVTLSYNGEKYVLGDHFLENG
CCCHHHCCEEEEECCCCCCCEEEEEECHHHHHCCCCEEEEEEEEECCCEEEECHHHHCCC
ESIEYANFYDLDSDGYKEVILLVKSKDKTNMHIYKVVDNEITKIYDLDASWLQNKEDFND
CCEEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCHHHHCCCCCCCC
MKVKIGYIDGDDKLDILMLHLNNKTNEMFASVANFDGKMKIKDSVKFENVKNLSELYITL
EEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHCHHHHHEEH
GNVASSVGNSSAAIKGIVLDIPILKDNNYITQILYMKDGKINKAFSDYDKTITKSYYIPV
HHHHHHCCCCCCEEEEEEEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHEEEEECC
DDIDKDKIIEIPIVAGSTGNNKNTYSSKSSATISWYRWNGKEGADSSLIFTSQIYYNYKY
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEE
NFKLFIPNNLFDKILVEQEFVGEKAVFKFYYFDYSDRKNLFNIVVESKNKLEDRKNTGTQ
EEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEECCCHHHHHHHCCCCC
NSIVLQESDEYTFLLVVNNANEMDKLDMTIDALKEYFSLIYG
CEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA