| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699388
Identifier: 126699388
GI number: 126699388
Start: 2060076
End: 2060879
Strand: Direct
Name: 126699388
Synonym: CD1779
Alternate gene names: NA
Gene position: 2060076-2060879 (Clockwise)
Preceding gene: 126699387
Following gene: 126699389
Centisome position: 48.02
GC content: 27.36
Gene sequence:
>804_bases GTGAAGGAAAAAGAAAAATTAGATAAATTAAAAAAAATGTTACTTGAATTAGGCAGTGTTGTAGTTGCTTATTCTGGTGG AGTAGATAGTAATTTTTTGCTTAAGGTCGCAAAAGATACATTAGGTGAAAATGTTATAGCTGTGACTATTCATGCAATGA TGCATTCAAGTAGGGAAATTGAAGAGGCTAAACAATATACTCAAAATTTTGGTGTTAAACATATCATATTAAATATAGAA AACTTTGATTTAAAAGAATTTAAAGAAAATGGTGTTGATAGATGTTATCATTGTAAAAAATATATATTCTCTAAAATAAA AGAGGTAGCAAAAGAACATAATATAAAGTACATAGTAGATGGAACAAATATAGATGATTTAGGAGACTATAGACCTGGGC TTAAGGCATTGAGTGAATTAGGAGTAATTAGTCCATTAAAAGATAGTAGTTTAAAAAAAGAAGAAATTAGGTCGCTTTCA AAAACATTAGGATTAAATACTTTTAATAAACCATCATTTGCATGTCTTGCGAGTAGGATACCTTATGGAGTTGAAATAAC AGATGAAAATTTAAGAATAGTAGAAAAGAGTGAAGAATATCTATCCAATTTAGGTTTTTCTCAATTTAGAGTGAGAATGC ATGGAGATATAGCTAGAATAGAAGTTGGACAGGAAGAACTAGGTAAATTTTTTGAAAATAACAATTTTAATAAAGTTGAT ACTAAATTAAAAATATTTGGCTTTAAATATGTTACACTAGATATGTCAGGATATAAAATGGGAAGTATGAATTTAAATGT GTAG
Upstream 100 bases:
>100_bases TTTATAAAATAAATACTTTATATGTTATAATCATTAAGAATGTAAAAAAATAATATATAGTTTTATAGTTCATATTTTTC CAGATATGGAGGTAAATTTT
Downstream 100 bases:
>100_bases ATTATTTTAAAAATAAATAAGTTTTATAGTTAATATAAGGAAACAGGAGGTTTTATGAAAAATTATACGTTAATATCGCC ATGTTTTTTTGGAATGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREIEEAKQYTQNFGVKHIILNIE NFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVDGTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLS KTLGLNTFNKPSFACLASRIPYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD TKLKIFGFKYVTLDMSGYKMGSMNLNV
Sequences:
>Translated_267_residues MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREIEEAKQYTQNFGVKHIILNIE NFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVDGTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLS KTLGLNTFNKPSFACLASRIPYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD TKLKIFGFKYVTLDMSGYKMGSMNLNV >Mature_267_residues MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREIEEAKQYTQNFGVKHIILNIE NFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVDGTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLS KTLGLNTFNKPSFACLASRIPYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD TKLKIFGFKYVTLDMSGYKMGSMNLNV
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 30384; Mature: 30384
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREI CCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHCHHHH EEAKQYTQNFGVKHIILNIENFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVD HHHHHHHHHCCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC GTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLSKTLGLNTFNKPSFACLASRI CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCC PYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD CCCEEEECCCCEEEEHHHHHHHHCCHHHEEEEECCCEEEEECCHHHHHHHHHCCCCCCCC TKLKIFGFKYVTLDMSGYKMGSMNLNV CEEEEEEEEEEEEEECCCEECCEECCC >Mature Secondary Structure MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREI CCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHCHHHH EEAKQYTQNFGVKHIILNIENFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVD HHHHHHHHHCCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC GTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLSKTLGLNTFNKPSFACLASRI CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCC PYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD CCCEEEECCCCEEEEHHHHHHHHCCHHHEEEEECCCEEEEECCHHHHHHHHHCCCCCCCC TKLKIFGFKYVTLDMSGYKMGSMNLNV CEEEEEEEEEEEEEECCCEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]