Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126699387

Identifier: 126699387

GI number: 126699387

Start: 2059089

End: 2059790

Strand: Direct

Name: 126699387

Synonym: CD1778

Alternate gene names: NA

Gene position: 2059089-2059790 (Clockwise)

Preceding gene: 126699386

Following gene: 126699388

Centisome position: 47.99

GC content: 26.21

Gene sequence:

>702_bases
ATGAGTATTGAAGATTTATATGATTTTGAATGTGTTCCTTTGAACAATGAGATTGATATTGATGTTTTATTTGAAAAGAT
GATAGAAGATGGAAAAGAAAAAGAATATACACCAATTATAGTCATTGATGAAAAAGTAGGGCTATTAAGAAAAAATATAG
ATATGATTACTAAAGAGTATGGTTCTCTTGAAAACTATAGGGAGTATTGTTTAACAAAATATAATGAAATTGATGTAAAT
CAATTTTTTGATTTTAGGAAGAGTGAGATTTCAGAATTATTAAAGGAGCTAATTGATTTAGAAGATGATTTTTATGATTA
TAAACATTTTAGACCAATTATGAATATAGATATATTTCATGAATATAACAAAGTTTACATAGCTAAAATTCCAACAATTA
AACCATATGAAGTATTTGCATACATACCTATTGGTGGATTTAATGATTGTCCTAGAGATGAAGAACATATAGCTATTGCA
AAATATTGGTATGAAAAGCATGGAATCTTTCCAATCGCAATTGGATGTGATACAGTTCAATATTCTGTAAAAAATTTAAC
TAAAGATGGTAAAAAATTTGATGACTTATGTATTGAATTAGTATTTTATTGTGAGGATATTATTATACAAGGGTATGAAA
CCTTAAAGGCTCTTAAGGATGTATTAAAACGCTCTACAATAGTGCTTTTTTGGTGGGATTGA

Upstream 100 bases:

>100_bases
TTGCCTCTATATTTATAGTTTAAATAATAGTGGTATTAAAAATCTGACAACAAAAATAAAACTTTCAAAAAATTAAATCT
AAAAAGAATAGGAGATAAAT

Downstream 100 bases:

>100_bases
TATTCTATCATTTAGACAGCATTAAATTGTTAGTCACCAAGAATCCACTTGCTTTAGTTATGGGGAGTGTGTCAAACTAG
GTTTTTATACACAGTGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSIEDLYDFECVPLNNEIDIDVLFEKMIEDGKEKEYTPIIVIDEKVGLLRKNIDMITKEYGSLENYREYCLTKYNEIDVN
QFFDFRKSEISELLKELIDLEDDFYDYKHFRPIMNIDIFHEYNKVYIAKIPTIKPYEVFAYIPIGGFNDCPRDEEHIAIA
KYWYEKHGIFPIAIGCDTVQYSVKNLTKDGKKFDDLCIELVFYCEDIIIQGYETLKALKDVLKRSTIVLFWWD

Sequences:

>Translated_233_residues
MSIEDLYDFECVPLNNEIDIDVLFEKMIEDGKEKEYTPIIVIDEKVGLLRKNIDMITKEYGSLENYREYCLTKYNEIDVN
QFFDFRKSEISELLKELIDLEDDFYDYKHFRPIMNIDIFHEYNKVYIAKIPTIKPYEVFAYIPIGGFNDCPRDEEHIAIA
KYWYEKHGIFPIAIGCDTVQYSVKNLTKDGKKFDDLCIELVFYCEDIIIQGYETLKALKDVLKRSTIVLFWWD
>Mature_232_residues
SIEDLYDFECVPLNNEIDIDVLFEKMIEDGKEKEYTPIIVIDEKVGLLRKNIDMITKEYGSLENYREYCLTKYNEIDVNQ
FFDFRKSEISELLKELIDLEDDFYDYKHFRPIMNIDIFHEYNKVYIAKIPTIKPYEVFAYIPIGGFNDCPRDEEHIAIAK
YWYEKHGIFPIAIGCDTVQYSVKNLTKDGKKFDDLCIELVFYCEDIIIQGYETLKALKDVLKRSTIVLFWWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27801; Mature: 27670

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEDLYDFECVPLNNEIDIDVLFEKMIEDGKEKEYTPIIVIDEKVGLLRKNIDMITKEY
CCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
GSLENYREYCLTKYNEIDVNQFFDFRKSEISELLKELIDLEDDFYDYKHFRPIMNIDIFH
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCEEEEE
EYNKVYIAKIPTIKPYEVFAYIPIGGFNDCPRDEEHIAIAKYWYEKHGIFPIAIGCDTVQ
ECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHCCCEEEEECCCHHH
YSVKNLTKDGKKFDDLCIELVFYCEDIIIQGYETLKALKDVLKRSTIVLFWWD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEEC
>Mature Secondary Structure 
SIEDLYDFECVPLNNEIDIDVLFEKMIEDGKEKEYTPIIVIDEKVGLLRKNIDMITKEY
CCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
GSLENYREYCLTKYNEIDVNQFFDFRKSEISELLKELIDLEDDFYDYKHFRPIMNIDIFH
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCEEEEE
EYNKVYIAKIPTIKPYEVFAYIPIGGFNDCPRDEEHIAIAKYWYEKHGIFPIAIGCDTVQ
ECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHCCCEEEEECCCHHH
YSVKNLTKDGKKFDDLCIELVFYCEDIIIQGYETLKALKDVLKRSTIVLFWWD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA