Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699388

Identifier: 126699388

GI number: 126699388

Start: 2060076

End: 2060879

Strand: Direct

Name: 126699388

Synonym: CD1779

Alternate gene names: NA

Gene position: 2060076-2060879 (Clockwise)

Preceding gene: 126699387

Following gene: 126699389

Centisome position: 48.02

GC content: 27.36

Gene sequence:

>804_bases
GTGAAGGAAAAAGAAAAATTAGATAAATTAAAAAAAATGTTACTTGAATTAGGCAGTGTTGTAGTTGCTTATTCTGGTGG
AGTAGATAGTAATTTTTTGCTTAAGGTCGCAAAAGATACATTAGGTGAAAATGTTATAGCTGTGACTATTCATGCAATGA
TGCATTCAAGTAGGGAAATTGAAGAGGCTAAACAATATACTCAAAATTTTGGTGTTAAACATATCATATTAAATATAGAA
AACTTTGATTTAAAAGAATTTAAAGAAAATGGTGTTGATAGATGTTATCATTGTAAAAAATATATATTCTCTAAAATAAA
AGAGGTAGCAAAAGAACATAATATAAAGTACATAGTAGATGGAACAAATATAGATGATTTAGGAGACTATAGACCTGGGC
TTAAGGCATTGAGTGAATTAGGAGTAATTAGTCCATTAAAAGATAGTAGTTTAAAAAAAGAAGAAATTAGGTCGCTTTCA
AAAACATTAGGATTAAATACTTTTAATAAACCATCATTTGCATGTCTTGCGAGTAGGATACCTTATGGAGTTGAAATAAC
AGATGAAAATTTAAGAATAGTAGAAAAGAGTGAAGAATATCTATCCAATTTAGGTTTTTCTCAATTTAGAGTGAGAATGC
ATGGAGATATAGCTAGAATAGAAGTTGGACAGGAAGAACTAGGTAAATTTTTTGAAAATAACAATTTTAATAAAGTTGAT
ACTAAATTAAAAATATTTGGCTTTAAATATGTTACACTAGATATGTCAGGATATAAAATGGGAAGTATGAATTTAAATGT
GTAG

Upstream 100 bases:

>100_bases
TTTATAAAATAAATACTTTATATGTTATAATCATTAAGAATGTAAAAAAATAATATATAGTTTTATAGTTCATATTTTTC
CAGATATGGAGGTAAATTTT

Downstream 100 bases:

>100_bases
ATTATTTTAAAAATAAATAAGTTTTATAGTTAATATAAGGAAACAGGAGGTTTTATGAAAAATTATACGTTAATATCGCC
ATGTTTTTTTGGAATGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREIEEAKQYTQNFGVKHIILNIE
NFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVDGTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLS
KTLGLNTFNKPSFACLASRIPYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD
TKLKIFGFKYVTLDMSGYKMGSMNLNV

Sequences:

>Translated_267_residues
MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREIEEAKQYTQNFGVKHIILNIE
NFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVDGTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLS
KTLGLNTFNKPSFACLASRIPYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD
TKLKIFGFKYVTLDMSGYKMGSMNLNV
>Mature_267_residues
MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREIEEAKQYTQNFGVKHIILNIE
NFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVDGTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLS
KTLGLNTFNKPSFACLASRIPYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD
TKLKIFGFKYVTLDMSGYKMGSMNLNV

Specific function: Unknown

COG id: COG1606

COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0830 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005232
- InterPro:   IPR022310
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02540 NAD_synthase [H]

EC number: NA

Molecular weight: Translated: 30384; Mature: 30384

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREI
CCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHCHHHH
EEAKQYTQNFGVKHIILNIENFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVD
HHHHHHHHHCCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
GTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLSKTLGLNTFNKPSFACLASRI
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD
CCCEEEECCCCEEEEHHHHHHHHCCHHHEEEEECCCEEEEECCHHHHHHHHHCCCCCCCC
TKLKIFGFKYVTLDMSGYKMGSMNLNV
CEEEEEEEEEEEEEECCCEECCEECCC
>Mature Secondary Structure
MKEKEKLDKLKKMLLELGSVVVAYSGGVDSNFLLKVAKDTLGENVIAVTIHAMMHSSREI
CCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHCHHHH
EEAKQYTQNFGVKHIILNIENFDLKEFKENGVDRCYHCKKYIFSKIKEVAKEHNIKYIVD
HHHHHHHHHCCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
GTNIDDLGDYRPGLKALSELGVISPLKDSSLKKEEIRSLSKTLGLNTFNKPSFACLASRI
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PYGVEITDENLRIVEKSEEYLSNLGFSQFRVRMHGDIARIEVGQEELGKFFENNNFNKVD
CCCEEEECCCCEEEEHHHHHHHHCCHHHEEEEECCCEEEEECCHHHHHHHHHCCCCCCCC
TKLKIFGFKYVTLDMSGYKMGSMNLNV
CEEEEEEEEEEEEEECCCEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]