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The map label for this gene is yjdF [H]

Identifier: 126699371

GI number: 126699371

Start: 2040602

End: 2041021

Strand: Direct

Name: yjdF [H]

Synonym: CD1762

Alternate gene names: 126699371

Gene position: 2040602-2041021 (Clockwise)

Preceding gene: 126699370

Following gene: 126699373

Centisome position: 47.56

GC content: 29.05

Gene sequence:

>420_bases
ATGGACAAAATTAGTGGAAAATTAACAGTCTTATTTGAAGAACCATTTTGGGTAGGTATATTTGAAAGACAAGTTGGTAA
AAAATATGAAGCATGTAGGGTAGTTTTTGGAGCAGAACCTAAAGAAGTAGAAGTGTATGAATTTATACTTGAAAGATTTT
TCTCATTAGATTTTGGTAGCATTAAATTAGAAAAAAATGTGACCAAAGACAACATTGGATACAAAAGAATGCAGAGAAAA
GTAAAAAAGGAACAAGAAAAAGAAACTATAGGGACTAAGGCTCAAAATGCTCTTAAGCTTCAATATGAAGAAAGAAAACA
GGATAGAAAAAACCTAGCTAAAAATAGAAAAGAAGAAGAAAAAGAAAGACTATTTAATTTGAAACAAGAAAAGAGAAAAG
CTAAACATAAGGGTCATTAA

Upstream 100 bases:

>100_bases
AAACACAGTCTGGTTGGTAGTCCAGACGCAGCAATAGCTGTCAGTAACCTGCCTCCTTGGTTGTCCGTTCTTTAGAAAGT
AATTTAAGGAGGAACTAGCA

Downstream 100 bases:

>100_bases
TTTTAATTAAATATCTTTTTAATAATTGCTAGAAAAAGGTGTATAAAATTTTTAATTTTATACACCTTAATTTATTGAAA
AGAATAAGGTTTTATATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDKISGKLTVLFEEPFWVGIFERQVGKKYEACRVVFGAEPKEVEVYEFILERFFSLDFGSIKLEKNVTKDNIGYKRMQRK
VKKEQEKETIGTKAQNALKLQYEERKQDRKNLAKNRKEEEKERLFNLKQEKRKAKHKGH

Sequences:

>Translated_139_residues
MDKISGKLTVLFEEPFWVGIFERQVGKKYEACRVVFGAEPKEVEVYEFILERFFSLDFGSIKLEKNVTKDNIGYKRMQRK
VKKEQEKETIGTKAQNALKLQYEERKQDRKNLAKNRKEEEKERLFNLKQEKRKAKHKGH
>Mature_139_residues
MDKISGKLTVLFEEPFWVGIFERQVGKKYEACRVVFGAEPKEVEVYEFILERFFSLDFGSIKLEKNVTKDNIGYKRMQRK
VKKEQEKETIGTKAQNALKLQYEERKQDRKNLAKNRKEEEKERLFNLKQEKRKAKHKGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016787 [H]

Pfam domain/function: PF11208 DUF2992 [H]

EC number: NA

Molecular weight: Translated: 16657; Mature: 16657

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKISGKLTVLFEEPFWVGIFERQVGKKYEACRVVFGAEPKEVEVYEFILERFFSLDFGS
CCCCCCEEEEEEECCEEEHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
IKLEKNVTKDNIGYKRMQRKVKKEQEKETIGTKAQNALKLQYEERKQDRKNLAKNRKEEE
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KERLFNLKQEKRKAKHKGH
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKISGKLTVLFEEPFWVGIFERQVGKKYEACRVVFGAEPKEVEVYEFILERFFSLDFGS
CCCCCCEEEEEEECCEEEHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
IKLEKNVTKDNIGYKRMQRKVKKEQEKETIGTKAQNALKLQYEERKQDRKNLAKNRKEEE
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KERLFNLKQEKRKAKHKGH
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]