| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126699373
Identifier: 126699373
GI number: 126699373
Start: 2041602
End: 2042303
Strand: Direct
Name: 126699373
Synonym: CD1764
Alternate gene names: NA
Gene position: 2041602-2042303 (Clockwise)
Preceding gene: 126699371
Following gene: 126699374
Centisome position: 47.59
GC content: 27.64
Gene sequence:
>702_bases ATGAAATTTATAGTAGAAAAAGAAGTTTTTGATAAATTAGAAAATGTATGCTTTGGTGTAGTAGTTGCAAAAGGAATAGA TAATACTAAAGAAATAGAAAGAATAAGCAACCTTTTAGATATAAGTATAGATAGAGTAGAAGATTACTTCAAAGATAAAA AAGTAAAGGAATCAGAAGAAATTATACCATATAGAGAGGCATTTAGAAGTCTAGGCATGAACCCAAATAAATTTATGAGT TCGATAGAAGCAATGACAACAAGGGTTGCTAAGAATAAGAAACTTCCTCATATAAATCCTATTGTAGATTTAGGAAACTC TATTTCTTTAAAATATTTACTTCCAATGGGTGCTCATGATATGGATTTTAGAAATGATGATGTATATGTTAGATTTTCTA AAAAAGGGGATAAATTTGTACCATTTGGAGAAACTGATGTTGAATTAATGGAAGAAGGAGAATTAATTTATTCAGTTGGA GACATGGTAAAAACTAGAAGATGGATATGGAGACAAGGAGAAGAAGGAAAAATTACTAATAGCTCAAAAAATATATTTTT TCCTATAGATGGTTTTACTGATGCTAATTTAGATAAGGTAATGAGTGCAAGAGAAGAATTAGCAAAATTGTTAAAGGAAA TATTTAATTGTGAAATTAAAGTAGGTTTTGTAGATAAAGATAATCCTGAAATGGAAATATAA
Upstream 100 bases:
>100_bases AAAAAATTAAACAATTAGCAAATAGGGGGTATATTTATAAGACACAAAGTGATAAAATCTATTTAGAAAATAATGTAAAA TAACAGGAGGATAAAGCAAA
Downstream 100 bases:
>100_bases TAAGTTGTTGAATACTTGTTAAGATATTATATTTACTTAATGATGTTAAAAAGGTATTAAAAAAGAAAGGTCGTAGTAAA TTTGAAAAAAACTATAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: B3/4 Domain-Containing Protein; Solo B3/4 Domain-Containing Protein; Cytoplasmic Protein; Phosphoenolpyruvate Synthase; tRNA Ligase
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKFIVEKEVFDKLENVCFGVVVAKGIDNTKEIERISNLLDISIDRVEDYFKDKKVKESEEIIPYREAFRSLGMNPNKFMS SIEAMTTRVAKNKKLPHINPIVDLGNSISLKYLLPMGAHDMDFRNDDVYVRFSKKGDKFVPFGETDVELMEEGELIYSVG DMVKTRRWIWRQGEEGKITNSSKNIFFPIDGFTDANLDKVMSAREELAKLLKEIFNCEIKVGFVDKDNPEMEI
Sequences:
>Translated_233_residues MKFIVEKEVFDKLENVCFGVVVAKGIDNTKEIERISNLLDISIDRVEDYFKDKKVKESEEIIPYREAFRSLGMNPNKFMS SIEAMTTRVAKNKKLPHINPIVDLGNSISLKYLLPMGAHDMDFRNDDVYVRFSKKGDKFVPFGETDVELMEEGELIYSVG DMVKTRRWIWRQGEEGKITNSSKNIFFPIDGFTDANLDKVMSAREELAKLLKEIFNCEIKVGFVDKDNPEMEI >Mature_233_residues MKFIVEKEVFDKLENVCFGVVVAKGIDNTKEIERISNLLDISIDRVEDYFKDKKVKESEEIIPYREAFRSLGMNPNKFMS SIEAMTTRVAKNKKLPHINPIVDLGNSISLKYLLPMGAHDMDFRNDDVYVRFSKKGDKFVPFGETDVELMEEGELIYSVG DMVKTRRWIWRQGEEGKITNSSKNIFFPIDGFTDANLDKVMSAREELAKLLKEIFNCEIKVGFVDKDNPEMEI
Specific function: Unknown
COG id: COG3382
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26911; Mature: 26911
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIVEKEVFDKLENVCFGVVVAKGIDNTKEIERISNLLDISIDRVEDYFKDKKVKESEE CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IIPYREAFRSLGMNPNKFMSSIEAMTTRVAKNKKLPHINPIVDLGNSISLKYLLPMGAHD CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCC MDFRNDDVYVRFSKKGDKFVPFGETDVELMEEGELIYSVGDMVKTRRWIWRQGEEGKITN CCCCCCCEEEEECCCCCEECCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCEEC SSKNIFFPIDGFTDANLDKVMSAREELAKLLKEIFNCEIKVGFVDKDNPEMEI CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC >Mature Secondary Structure MKFIVEKEVFDKLENVCFGVVVAKGIDNTKEIERISNLLDISIDRVEDYFKDKKVKESEE CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IIPYREAFRSLGMNPNKFMSSIEAMTTRVAKNKKLPHINPIVDLGNSISLKYLLPMGAHD CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCC MDFRNDDVYVRFSKKGDKFVPFGETDVELMEEGELIYSVGDMVKTRRWIWRQGEEGKITN CCCCCCCEEEEECCCCCEECCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCEEC SSKNIFFPIDGFTDANLDKVMSAREELAKLLKEIFNCEIKVGFVDKDNPEMEI CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA