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The map label for this gene is 126699363

Identifier: 126699363

GI number: 126699363

Start: 2034340

End: 2034603

Strand: Direct

Name: 126699363

Synonym: CD1755A

Alternate gene names: NA

Gene position: 2034340-2034603 (Clockwise)

Preceding gene: 126699362

Following gene: 126699364

Centisome position: 47.42

GC content: 28.41

Gene sequence:

>264_bases
ATGAAAAATAAAATAAAGATATTAAGAGAAAAATTAGGATTGACACAAGAACAACTAGGGAGATTAGTTGGAACATCTAG
ACAGGCTATAAATGCTATAGAAACTGGTAAAAATGAACCTTCAATATGGTTGGCATATGATATTTCAAGAATTTTTAATG
AACCAATTGAAAGTGTATTTTTATTTGAAGAAAGTGAAAGAAAATCAAGAGCACAGATAAGTAGGGGAGAATATTATGGC
TATAAGAAAGATAAGAACATTTGA

Upstream 100 bases:

>100_bases
ATAAGAAAATTTAATATATAAATGTAAGGTTGACTTGACAGTAATGTTGAAAAATGTTACATTTAAGATGTAAAGTTAAC
CTTACATGAATGGAGCAAAT

Downstream 100 bases:

>100_bases
TGATGAAATTTTAAGAAAAAAGAGTAAGTATGTAGAAAACGTAGATAATAAGATAAGAGAAATATTAAATGACATGGCAG
AGACCATGTACAATACTCCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKNKIKILREKLGLTQEQLGRLVGTSRQAINAIETGKNEPSIWLAYDISRIFNEPIESVFLFEESERKSRAQISRGEYYG
YKKDKNI

Sequences:

>Translated_87_residues
MKNKIKILREKLGLTQEQLGRLVGTSRQAINAIETGKNEPSIWLAYDISRIFNEPIESVFLFEESERKSRAQISRGEYYG
YKKDKNI
>Mature_87_residues
MKNKIKILREKLGLTQEQLGRLVGTSRQAINAIETGKNEPSIWLAYDISRIFNEPIESVFLFEESERKSRAQISRGEYYG
YKKDKNI

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 10137; Mature: 10137

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKIKILREKLGLTQEQLGRLVGTSRQAINAIETGKNEPSIWLAYDISRIFNEPIESVF
CCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
LFEESERKSRAQISRGEYYGYKKDKNI
HCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNKIKILREKLGLTQEQLGRLVGTSRQAINAIETGKNEPSIWLAYDISRIFNEPIESVF
CCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
LFEESERKSRAQISRGEYYGYKKDKNI
HCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]