| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699362
Identifier: 126699362
GI number: 126699362
Start: 2033527
End: 2034243
Strand: Direct
Name: 126699362
Synonym: CD1755
Alternate gene names: NA
Gene position: 2033527-2034243 (Clockwise)
Preceding gene: 126699361
Following gene: 126699363
Centisome position: 47.4
GC content: 24.41
Gene sequence:
>717_bases ATGATAAAGATTATAAATGCGTTTAAACAAGAGTTTGAACAAATTAAGAGAGATGCTATGCTTTTTATAGTATGTGTTTC TCCAATATTATGTGGAGTATTTATAAAATTTGGAATACCATTAATACAGAATATATCACTTAACAAGTTTTATTATCAAT TAAATTTAGAGCCGTATTTCTTGATGTTTGATTTACTTTTAGCTTTTATTACACCTTTTATGTTCTTTTTTGCTTCTACA ATGGTCATATTGGGAGAAATTGATGACAGCATTTCAAGATATTTAATAGTAACTCCGCTTGGTAAAACTGGTTATCTTAT TTCACGATTTGGAATACCAGGTATCTTAGCATTTATTATTACTATGATTCTACTTATCTTTTTTTCTCTAACTAAAATTT CTCTCTTGTTAAACTTATCAATTTCTTTATTAGTTTTATTACAAGGAGTTATTATATCAATATTAGTGATTTCTTTATCA TCAAATAAACTAGAAGGAATGGTAATTACGAAATTCTCAGGTGTTTTTATGATGGGTATTTTAGCACCATTTTTTATTTT AAATAAAGCACAATATATTCTGTTCTTCTTACCAACTTTTTGGATATCGAAGGCATTTAAGGAAGATAATTATGTCTATA TGTTTATTTCAATTGTTATATCATTAATATGGATTTTATTATTATTTAAAAAGTTTAGTAAAAAAATAGTTAAATAA
Upstream 100 bases:
>100_bases TGATTAATATTTTAATTTTAATATCAATTATAATAATAATTTATTTTATAACTTATTATTTTATTTGTAGCAGTTGGAAA AAGGTAGGTGGAGTAAAACT
Downstream 100 bases:
>100_bases GAAAATTTAATATATAAATGTAAGGTTGACTTGACAGTAATGTTGAAAAATGTTACATTTAAGATGTAAAGTTAACCTTA CATGAATGGAGCAAATATGA
Product: ABC transporter permease
Products: NA
Alternate protein names: Abc Transporter Permease Protein
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYFLMFDLLLAFITPFMFFFAST MVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFIITMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLS SNKLEGMVITKFSGVFMMGILAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK
Sequences:
>Translated_238_residues MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYFLMFDLLLAFITPFMFFFAST MVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFIITMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLS SNKLEGMVITKFSGVFMMGILAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK >Mature_238_residues MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYFLMFDLLLAFITPFMFFFAST MVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFIITMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLS SNKLEGMVITKFSGVFMMGILAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27340; Mature: 27340
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCHHH LMFDLLLAFITPFMFFFASTMVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCHHHHHHHH TMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLSSNKLEGMVITKFSGVFMMGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH LAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCHHH LMFDLLLAFITPFMFFFASTMVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCHHHHHHHH TMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLSSNKLEGMVITKFSGVFMMGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH LAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA