Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699362

Identifier: 126699362

GI number: 126699362

Start: 2033527

End: 2034243

Strand: Direct

Name: 126699362

Synonym: CD1755

Alternate gene names: NA

Gene position: 2033527-2034243 (Clockwise)

Preceding gene: 126699361

Following gene: 126699363

Centisome position: 47.4

GC content: 24.41

Gene sequence:

>717_bases
ATGATAAAGATTATAAATGCGTTTAAACAAGAGTTTGAACAAATTAAGAGAGATGCTATGCTTTTTATAGTATGTGTTTC
TCCAATATTATGTGGAGTATTTATAAAATTTGGAATACCATTAATACAGAATATATCACTTAACAAGTTTTATTATCAAT
TAAATTTAGAGCCGTATTTCTTGATGTTTGATTTACTTTTAGCTTTTATTACACCTTTTATGTTCTTTTTTGCTTCTACA
ATGGTCATATTGGGAGAAATTGATGACAGCATTTCAAGATATTTAATAGTAACTCCGCTTGGTAAAACTGGTTATCTTAT
TTCACGATTTGGAATACCAGGTATCTTAGCATTTATTATTACTATGATTCTACTTATCTTTTTTTCTCTAACTAAAATTT
CTCTCTTGTTAAACTTATCAATTTCTTTATTAGTTTTATTACAAGGAGTTATTATATCAATATTAGTGATTTCTTTATCA
TCAAATAAACTAGAAGGAATGGTAATTACGAAATTCTCAGGTGTTTTTATGATGGGTATTTTAGCACCATTTTTTATTTT
AAATAAAGCACAATATATTCTGTTCTTCTTACCAACTTTTTGGATATCGAAGGCATTTAAGGAAGATAATTATGTCTATA
TGTTTATTTCAATTGTTATATCATTAATATGGATTTTATTATTATTTAAAAAGTTTAGTAAAAAAATAGTTAAATAA

Upstream 100 bases:

>100_bases
TGATTAATATTTTAATTTTAATATCAATTATAATAATAATTTATTTTATAACTTATTATTTTATTTGTAGCAGTTGGAAA
AAGGTAGGTGGAGTAAAACT

Downstream 100 bases:

>100_bases
GAAAATTTAATATATAAATGTAAGGTTGACTTGACAGTAATGTTGAAAAATGTTACATTTAAGATGTAAAGTTAACCTTA
CATGAATGGAGCAAATATGA

Product: ABC transporter permease

Products: NA

Alternate protein names: Abc Transporter Permease Protein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYFLMFDLLLAFITPFMFFFAST
MVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFIITMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLS
SNKLEGMVITKFSGVFMMGILAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK

Sequences:

>Translated_238_residues
MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYFLMFDLLLAFITPFMFFFAST
MVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFIITMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLS
SNKLEGMVITKFSGVFMMGILAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK
>Mature_238_residues
MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYFLMFDLLLAFITPFMFFFAST
MVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFIITMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLS
SNKLEGMVITKFSGVFMMGILAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27340; Mature: 27340

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCHHH
LMFDLLLAFITPFMFFFASTMVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCHHHHHHHH
TMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLSSNKLEGMVITKFSGVFMMGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH
LAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKIINAFKQEFEQIKRDAMLFIVCVSPILCGVFIKFGIPLIQNISLNKFYYQLNLEPYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCHHH
LMFDLLLAFITPFMFFFASTMVILGEIDDSISRYLIVTPLGKTGYLISRFGIPGILAFII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCHHHHHHHH
TMILLIFFSLTKISLLLNLSISLLVLLQGVIISILVISLSSNKLEGMVITKFSGVFMMGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH
LAPFFILNKAQYILFFLPTFWISKAFKEDNYVYMFISIVISLIWILLLFKKFSKKIVK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA