| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is mtbA [H]
Identifier: 126699340
GI number: 126699340
Start: 2007799
End: 2008821
Strand: Direct
Name: mtbA [H]
Synonym: CD1733
Alternate gene names: 126699340
Gene position: 2007799-2008821 (Clockwise)
Preceding gene: 126699339
Following gene: 126699341
Centisome position: 46.8
GC content: 30.01
Gene sequence:
>1023_bases ATGTTTTCAGATATGACTTTACTTCAGTATATAAATAGTGAAGATAGAGGTTTTTTTCTGCCTGATATGGGTACAAATGG ATTGTTCTTAATAAATAAAAAGGCATATGAAGTATATGATAGTGTAGATTTGCAATTAGAATTAGCAAAGACTATGGACA AGTATTTTGAATCAGATTTTATATACTCATTCTGTGATGGGATTACATTTTGTGAAACTCTGGGTTTAGAGACATTAAGA CCAGATTATGATTTTCCAAGTGTATTGACACATACTATAACTGACAGAGATAAATTAAGAAAATTAGATGTTCCAGACCC TTATACGAGTGGACGTATGCCACTCAATATAGAGAGCTTATCAGTTATATCAAAAAGTATTAAAAAACCACTATATGAAT CGATACAAGGTCCATTTACACTTGCAGGTCAATTAGCTGGAGCTACTCAACTTTTAAGATGTATAATAACTGATAAAAAA TTTGTAGAAGAATTATTGGAATTTACAACTGAATTGGTAAGAAGATATGCTGTAGCTGCAAATAAAGCAGGAGCAAAATA TATTTCAATAGCAGAGCCAACATCAGTAACCCTAAGTAAAGATAGATTTGATGAATTTATAGTAAAAAATTTAAATAAAA TCTACAATGAACTTGATTGTTGGAAAGGTATGCATATATGTGGAGACACCAGAGAATTATTAGATAATATGCTAAGTTGT AATATAGATGCAGTAAGTTTAGACCAAATTTTAGACTATGAAGAAATTGCTCCTATGATTCCTAGAGATATAGTTTTGAT TGGTAATTTAGACCCAATAAAACTTCTTGGACGTTCTAAGCCAGATAAGATTAGAAGAGAGACGCTAAAATTGTTAAAGA AGATGAGAAGATATGATAACTTTTTATGTGATTTTGGTTGTAACTGCTTAAATACCACTCCAGTAGAAAATTTACAAGCA GCTATAAAGGCAGGAAGAATTAGTTATAAAGAATTAGATAGGATTGATATTGATGAATTATAA
Upstream 100 bases:
>100_bases AAGTATGGAGTTTGCAGAAGAAATAGGAGCAGATGGATACAGTTCAAATGCTCCAAAAGCAGTTAAATTAATAAATAAAC TTATAGGAGGTGAAGTTTAA
Downstream 100 bases:
>100_bases TAGTAATAAAAATAAATATCTTTTAAAGGATATAAATTTAGATGATATTTTTATAGATAAGAATATTGTGCTAAAGTTTT TGGGGTATGGAAATAGAAAA
Product: methyltransferase
Products: NA
Alternate protein names: MT2-A; Methylcobamide:CoM methyltransferase II isozyme A [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MFSDMTLLQYINSEDRGFFLPDMGTNGLFLINKKAYEVYDSVDLQLELAKTMDKYFESDFIYSFCDGITFCETLGLETLR PDYDFPSVLTHTITDRDKLRKLDVPDPYTSGRMPLNIESLSVISKSIKKPLYESIQGPFTLAGQLAGATQLLRCIITDKK FVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEFIVKNLNKIYNELDCWKGMHICGDTRELLDNMLSC NIDAVSLDQILDYEEIAPMIPRDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRRYDNFLCDFGCNCLNTTPVENLQA AIKAGRISYKELDRIDIDEL
Sequences:
>Translated_340_residues MFSDMTLLQYINSEDRGFFLPDMGTNGLFLINKKAYEVYDSVDLQLELAKTMDKYFESDFIYSFCDGITFCETLGLETLR PDYDFPSVLTHTITDRDKLRKLDVPDPYTSGRMPLNIESLSVISKSIKKPLYESIQGPFTLAGQLAGATQLLRCIITDKK FVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEFIVKNLNKIYNELDCWKGMHICGDTRELLDNMLSC NIDAVSLDQILDYEEIAPMIPRDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRRYDNFLCDFGCNCLNTTPVENLQA AIKAGRISYKELDRIDIDEL >Mature_340_residues MFSDMTLLQYINSEDRGFFLPDMGTNGLFLINKKAYEVYDSVDLQLELAKTMDKYFESDFIYSFCDGITFCETLGLETLR PDYDFPSVLTHTITDRDKLRKLDVPDPYTSGRMPLNIESLSVISKSIKKPLYESIQGPFTLAGQLAGATQLLRCIITDKK FVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEFIVKNLNKIYNELDCWKGMHICGDTRELLDNMLSC NIDAVSLDQILDYEEIAPMIPRDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRRYDNFLCDFGCNCLNTTPVENLQA AIKAGRISYKELDRIDIDEL
Specific function: Catalyzes the transfer of the methyl group from the methylated corrinoid cofactor of mtmC, mtbC and mttC to coenzyme M [H]
COG id: COG0407
COG function: function code H; Uroporphyrinogen-III decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uroporphyrinogen decarboxylase family. MtbA/mtaA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006360 - InterPro: IPR000257 [H]
Pfam domain/function: PF01208 URO-D [H]
EC number: NA
Molecular weight: Translated: 38883; Mature: 38883
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDMTLLQYINSEDRGFFLPDMGTNGLFLINKKAYEVYDSVDLQLELAKTMDKYFESDF CCCCHHHHHHHCCCCCEEECCCCCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHH IYSFCDGITFCETLGLETLRPDYDFPSVLTHTITDRDKLRKLDVPDPYTSGRMPLNIESL HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHH SVISKSIKKPLYESIQGPFTLAGQLAGATQLLRCIITDKKFVEELLEFTTELVRRYAVAA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NKAGAKYISIAEPTSVTLSKDRFDEFIVKNLNKIYNELDCWKGMHICGDTRELLDNMLSC CCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC NIDAVSLDQILDYEEIAPMIPRDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRRYDN CCCCEEHHHHHCHHHHHCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLCDFGCNCLNTTPVENLQAAIKAGRISYKELDRIDIDEL HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCC >Mature Secondary Structure MFSDMTLLQYINSEDRGFFLPDMGTNGLFLINKKAYEVYDSVDLQLELAKTMDKYFESDF CCCCHHHHHHHCCCCCEEECCCCCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHH IYSFCDGITFCETLGLETLRPDYDFPSVLTHTITDRDKLRKLDVPDPYTSGRMPLNIESL HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHH SVISKSIKKPLYESIQGPFTLAGQLAGATQLLRCIITDKKFVEELLEFTTELVRRYAVAA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NKAGAKYISIAEPTSVTLSKDRFDEFIVKNLNKIYNELDCWKGMHICGDTRELLDNMLSC CCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC NIDAVSLDQILDYEEIAPMIPRDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRRYDN CCCCEEHHHHHCHHHHHCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLCDFGCNCLNTTPVENLQAAIKAGRISYKELDRIDIDEL HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]