| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is recQ [H]
Identifier: 126699307
GI number: 126699307
Start: 1973541
End: 1976024
Strand: Direct
Name: recQ [H]
Synonym: CD1701
Alternate gene names: 126699307
Gene position: 1973541-1976024 (Clockwise)
Preceding gene: 126699302
Following gene: 126699308
Centisome position: 46.0
GC content: 27.42
Gene sequence:
>2484_bases ATGAATAAAAAACTTTTAGAAATACTATCAAAATACTATGGATATACAAGTTTTAGAAAAGGTCAGGAATCTATAATAAA TTCTATCTTAAGCGAAAAAGATGTGTTAGCTATTATGCCAACAGGAGGGGGAAAATCAATATGTTATCAAATTCCAGCTT TGATTTTAGATGGAATGACAATAGTAATTTCTCCACTTATATCACTTATGAAAGACCAAGTAGATGCCTTAAAGACTATG GGAATTAGTGCTGCTTTTATAAATAGTTCATTAAGTAGCAAAGAATTTAATGAAATATTAAATAATATTAGAAAAAATAA TTATAAAATACTCTATATTGCTCCAGAGAGATTAGATGCACAAGAGTTTATTGAGCTAATAAATAATAACAATGTAAGTC AAGTTGCGATAGATGAAGCACATTGTGTATCTCAATGGGGGCATGATTTTAGGTTGAGTTATAGAAGGATTTCTGATTTT ATAAAAAATTTGCCTAAAAGACCCATAGTTACAGCATTTACTGCAACAGCTTCAGAAGAGGTAAGAACTGATATAATAAA TTTACTGTATTTAGAAAATCCAGATTATTATATAACTGGATTTGATAGAGAGAATTTATCAATAAATATAGTAAAATCAT CTAGTAAAAATAAGTATATTTTAGATTATATTCAAAATCATAAAAATGAGTCTGGAATTATATATGTTGCAACTAGAAAG GAAGTTGAAAATATATCTAATGGTTTATCTAAGAGAAATATATCTGTATCAAAATATCATGCAGGTTTATCTAAAAATGA AAGAAGTAAAAATCAAGAAGATTTTATAAATGATAATGTGGATATAATGGTAGCAACAAATGCATTTGGAATGGGTATTG ATAAACCTAATATAAGATGGGTTATACATTACAATATGCCTCAAAGTATAGAAAACTACTATCAAGAAATAGGTAGAGCT GGTAGGGATGGAGAAAAAAGTGAGTGTGTACTTTTATTTTCTCCAGGAGATGTACATATACAAAAATATTTAATTGATAT TGGAGTTGAAAATCCTGAAAGAAAATTATTTCAGCATAAGAAGCTTCAATACATGATTGACTTAGTTTACAGTAATTCAT GCTATAGAAAGACAATATTGAGTTATTTTGGAGAAAATTATATAGACAATTGCAATAATTGTAGCAATTGTTTAGTAGAG GGTGAAATAGTAGATAAAACTATAGATGCACAAAAAGTCATTTCATGTGTAGCTAGAATGAAAAGAAGTTATGGTGTTAC TACTATTGTAGATGTGCTTAGAGGTTCTAAGAATAAAAAGATTTTACAGCTTGGATTAAATACTTTGTCTACATATAACA TTATGAGAGATTATTCTAGTGAAGACTTAAAGAATTTTGTAAATACATTGGTTTCTCATGGTTTTTTAGATTTAGTTGAG ACTCTAGGCAATGGAAATAGAGGTAGTTTTCCTACTATAAGATTAAATGAGATGTCTATGAAAGTTTTAAAAGGTGAAGT GAAAGTAGAGTTTAAAGAAATTGTTATGACAAAATCATTGGAAGTAGAGGATGAGTTATATAATGCTTTAAGAGAACTTA GACATTCAATTGCAAGTGAAGAAAGGATAGCTCCATATATGGTATTTGGAGATGGTACACTTAGAGCCATGTCTAGTAGT TATCCAATTAATAAAGAAGAAATGCTAGATATCTCTGGAGTAGGAGAAATTAAATATCAAAAATATGGTAGAGATTTTGA AGCAGTAATTAAAGAATATGTCGAAAAAAATAATATAAATAAAAAAATAGATGAAAAAAATGTCGATTCAAAGAACGTTA ATAGTGATTTCTTAGAGGTTAATACAGATAAAGTTTTATATGAAAAACTGTTAGTCATTAGAGAAGAATATGCAACAAAG GAAAAATTACCTGCATATATGATTTTAGCCAATAAGGCTTTGAAAGAAATAAGTGGAAGATATCCACTTGATGAAGAACA ATTAAAAGATATTTCTGGCATAGGTGGAGTAAAATTTGAAAAATATGGAGCTAGTATTTTGGCAGAGGTTAATAAATATG TAAAAGAAAATAATATTAATGTTATTTGGGAGAAAAAGGGCAAAAGGAAGTTAATATTAGATGGAGAAAGTAGAAAAAAT AATGAAATAGCATTAGATTTGCTAAATCAAGGAAAAGATATACAAAGTATCAGTCAAGAAATAGAAGTTTCACTGTCAAC CATTATTGGATATGTGCATGACTATGTAAAGGATGGACATAGTATATCATTTGAATTAGGACTAGAAAATTTTTATAATG AAGATAAAAAGAAGATGATTTTAGAAGTTTGCGAAAAAGTTGGCTATGATAATTTAAATAACATAAAAAGAAAACTTCCA GATTCAATAAAGTATGAAAATATAAGAGCTGTGATACTTGACTCTTATCTTGAAAACTTAAAAAATAATATTATAGCAGA GTAA
Upstream 100 bases:
>100_bases TGTCTATAAACTTTGAAATACCACGATTGTGAATATAAAAATAAAAATTTGAACATAATCAGGAAAGAAGTCTAATTAAT TTAAATTAGGAGAGTAATAT
Downstream 100 bases:
>100_bases TTTTTAACTTAATAAAAAATAAAATTTGTATTATTGTGTTGAACTAATAATTTTGCTGTGTTATACTGAATTTGTAAAAA TAATGAAAAATTAGAGCTAG
Product: ATP-dependent DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MNKKLLEILSKYYGYTSFRKGQESIINSILSEKDVLAIMPTGGGKSICYQIPALILDGMTIVISPLISLMKDQVDALKTM GISAAFINSSLSSKEFNEILNNIRKNNYKILYIAPERLDAQEFIELINNNNVSQVAIDEAHCVSQWGHDFRLSYRRISDF IKNLPKRPIVTAFTATASEEVRTDIINLLYLENPDYYITGFDRENLSINIVKSSSKNKYILDYIQNHKNESGIIYVATRK EVENISNGLSKRNISVSKYHAGLSKNERSKNQEDFINDNVDIMVATNAFGMGIDKPNIRWVIHYNMPQSIENYYQEIGRA GRDGEKSECVLLFSPGDVHIQKYLIDIGVENPERKLFQHKKLQYMIDLVYSNSCYRKTILSYFGENYIDNCNNCSNCLVE GEIVDKTIDAQKVISCVARMKRSYGVTTIVDVLRGSKNKKILQLGLNTLSTYNIMRDYSSEDLKNFVNTLVSHGFLDLVE TLGNGNRGSFPTIRLNEMSMKVLKGEVKVEFKEIVMTKSLEVEDELYNALRELRHSIASEERIAPYMVFGDGTLRAMSSS YPINKEEMLDISGVGEIKYQKYGRDFEAVIKEYVEKNNINKKIDEKNVDSKNVNSDFLEVNTDKVLYEKLLVIREEYATK EKLPAYMILANKALKEISGRYPLDEEQLKDISGIGGVKFEKYGASILAEVNKYVKENNINVIWEKKGKRKLILDGESRKN NEIALDLLNQGKDIQSISQEIEVSLSTIIGYVHDYVKDGHSISFELGLENFYNEDKKKMILEVCEKVGYDNLNNIKRKLP DSIKYENIRAVILDSYLENLKNNIIAE
Sequences:
>Translated_827_residues MNKKLLEILSKYYGYTSFRKGQESIINSILSEKDVLAIMPTGGGKSICYQIPALILDGMTIVISPLISLMKDQVDALKTM GISAAFINSSLSSKEFNEILNNIRKNNYKILYIAPERLDAQEFIELINNNNVSQVAIDEAHCVSQWGHDFRLSYRRISDF IKNLPKRPIVTAFTATASEEVRTDIINLLYLENPDYYITGFDRENLSINIVKSSSKNKYILDYIQNHKNESGIIYVATRK EVENISNGLSKRNISVSKYHAGLSKNERSKNQEDFINDNVDIMVATNAFGMGIDKPNIRWVIHYNMPQSIENYYQEIGRA GRDGEKSECVLLFSPGDVHIQKYLIDIGVENPERKLFQHKKLQYMIDLVYSNSCYRKTILSYFGENYIDNCNNCSNCLVE GEIVDKTIDAQKVISCVARMKRSYGVTTIVDVLRGSKNKKILQLGLNTLSTYNIMRDYSSEDLKNFVNTLVSHGFLDLVE TLGNGNRGSFPTIRLNEMSMKVLKGEVKVEFKEIVMTKSLEVEDELYNALRELRHSIASEERIAPYMVFGDGTLRAMSSS YPINKEEMLDISGVGEIKYQKYGRDFEAVIKEYVEKNNINKKIDEKNVDSKNVNSDFLEVNTDKVLYEKLLVIREEYATK EKLPAYMILANKALKEISGRYPLDEEQLKDISGIGGVKFEKYGASILAEVNKYVKENNINVIWEKKGKRKLILDGESRKN NEIALDLLNQGKDIQSISQEIEVSLSTIIGYVHDYVKDGHSISFELGLENFYNEDKKKMILEVCEKVGYDNLNNIKRKLP DSIKYENIRAVILDSYLENLKNNIIAE >Mature_827_residues MNKKLLEILSKYYGYTSFRKGQESIINSILSEKDVLAIMPTGGGKSICYQIPALILDGMTIVISPLISLMKDQVDALKTM GISAAFINSSLSSKEFNEILNNIRKNNYKILYIAPERLDAQEFIELINNNNVSQVAIDEAHCVSQWGHDFRLSYRRISDF IKNLPKRPIVTAFTATASEEVRTDIINLLYLENPDYYITGFDRENLSINIVKSSSKNKYILDYIQNHKNESGIIYVATRK EVENISNGLSKRNISVSKYHAGLSKNERSKNQEDFINDNVDIMVATNAFGMGIDKPNIRWVIHYNMPQSIENYYQEIGRA GRDGEKSECVLLFSPGDVHIQKYLIDIGVENPERKLFQHKKLQYMIDLVYSNSCYRKTILSYFGENYIDNCNNCSNCLVE GEIVDKTIDAQKVISCVARMKRSYGVTTIVDVLRGSKNKKILQLGLNTLSTYNIMRDYSSEDLKNFVNTLVSHGFLDLVE TLGNGNRGSFPTIRLNEMSMKVLKGEVKVEFKEIVMTKSLEVEDELYNALRELRHSIASEERIAPYMVFGDGTLRAMSSS YPINKEEMLDISGVGEIKYQKYGRDFEAVIKEYVEKNNINKKIDEKNVDSKNVNSDFLEVNTDKVLYEKLLVIREEYATK EKLPAYMILANKALKEISGRYPLDEEQLKDISGIGGVKFEKYGASILAEVNKYVKENNINVIWEKKGKRKLILDGESRKN NEIALDLLNQGKDIQSISQEIEVSLSTIIGYVHDYVKDGHSISFELGLENFYNEDKKKMILEVCEKVGYDNLNNIKRKLP DSIKYENIRAVILDSYLENLKNNIIAE
Specific function: Probable DNA helicase. Required for DNA repair and intramolecular recombination; probably has overlapping function with recS (AC P50729). It probably acts to help generate ss-DNA from ds-DNA breaks [H]
COG id: COG0514
COG function: function code L; Superfamily II DNA helicase
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Localized throughout the nucleoid in the presence or absence of DNA double- strand breaks [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HRDC domain [H]
Homologues:
Organism=Homo sapiens, GI4557365, Length=650, Percent_Identity=33.2307692307692, Blast_Score=318, Evalue=2e-86, Organism=Homo sapiens, GI110735439, Length=506, Percent_Identity=35.7707509881423, Blast_Score=316, Evalue=7e-86, Organism=Homo sapiens, GI169218196, Length=506, Percent_Identity=35.7707509881423, Blast_Score=315, Evalue=1e-85, Organism=Homo sapiens, GI148612816, Length=430, Percent_Identity=35.8139534883721, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI51242947, Length=366, Percent_Identity=39.344262295082, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI14591902, Length=422, Percent_Identity=36.7298578199052, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI14591904, Length=422, Percent_Identity=36.7298578199052, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI51242943, Length=366, Percent_Identity=39.344262295082, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI284005309, Length=345, Percent_Identity=34.4927536231884, Blast_Score=226, Evalue=9e-59, Organism=Homo sapiens, GI13514831, Length=377, Percent_Identity=24.4031830238727, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=24.1573033707865, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI38327634, Length=361, Percent_Identity=22.1606648199446, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=24.1573033707865, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=24.1573033707865, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=24.1573033707865, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI222352149, Length=342, Percent_Identity=23.9766081871345, Blast_Score=82, Evalue=3e-15, Organism=Homo sapiens, GI21071032, Length=335, Percent_Identity=24.7761194029851, Blast_Score=81, Evalue=5e-15, Organism=Homo sapiens, GI148613856, Length=342, Percent_Identity=23.9766081871345, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI38201710, Length=342, Percent_Identity=23.9766081871345, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI7661920, Length=350, Percent_Identity=21.1428571428571, Blast_Score=76, Evalue=2e-13, Organism=Homo sapiens, GI4758112, Length=332, Percent_Identity=24.3975903614458, Blast_Score=76, Evalue=2e-13, Organism=Homo sapiens, GI18375623, Length=332, Percent_Identity=24.3975903614458, Blast_Score=76, Evalue=2e-13, Organism=Homo sapiens, GI45446747, Length=360, Percent_Identity=23.8888888888889, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI45446743, Length=360, Percent_Identity=23.8888888888889, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=24.0579710144928, Blast_Score=75, Evalue=3e-13, Organism=Homo sapiens, GI21040371, Length=340, Percent_Identity=22.9411764705882, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI31542656, Length=344, Percent_Identity=22.6744186046512, Blast_Score=74, Evalue=7e-13, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=22.9050279329609, Blast_Score=73, Evalue=1e-12, Organism=Homo sapiens, GI301171475, Length=227, Percent_Identity=26.8722466960352, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI41327773, Length=342, Percent_Identity=24.5614035087719, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI87196351, Length=227, Percent_Identity=26.8722466960352, Blast_Score=70, Evalue=9e-12, Organism=Homo sapiens, GI301171467, Length=377, Percent_Identity=22.0159151193634, Blast_Score=70, Evalue=1e-11, Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=22.0159151193634, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=22.0159151193634, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI164419743, Length=342, Percent_Identity=21.3450292397661, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI51094101, Length=342, Percent_Identity=21.3450292397661, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI41327771, Length=433, Percent_Identity=20.7852193995381, Blast_Score=69, Evalue=3e-11, Organism=Homo sapiens, GI13129006, Length=399, Percent_Identity=23.3082706766917, Blast_Score=68, Evalue=4e-11, Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=23.0547550432277, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI20149629, Length=354, Percent_Identity=21.7514124293785, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI48994977, Length=604, Percent_Identity=39.5695364238411, Blast_Score=480, Evalue=1e-136, Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=21.0242587601078, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1787016, Length=343, Percent_Identity=22.4489795918367, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25145561, Length=665, Percent_Identity=31.1278195488722, Blast_Score=318, Evalue=1e-86, Organism=Caenorhabditis elegans, GI32564293, Length=730, Percent_Identity=30.2739726027397, Blast_Score=308, Evalue=7e-84, Organism=Caenorhabditis elegans, GI71987997, Length=409, Percent_Identity=33.9853300733496, Blast_Score=271, Evalue=9e-73, Organism=Caenorhabditis elegans, GI71987993, Length=410, Percent_Identity=33.6585365853659, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17552866, Length=417, Percent_Identity=35.7314148681055, Blast_Score=248, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=23.728813559322, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32565321, Length=394, Percent_Identity=22.8426395939086, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71995724, Length=358, Percent_Identity=22.6256983240223, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17507121, Length=358, Percent_Identity=22.3463687150838, Blast_Score=84, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71995718, Length=371, Percent_Identity=25.3369272237197, Blast_Score=82, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17555296, Length=340, Percent_Identity=24.1176470588235, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17537549, Length=338, Percent_Identity=24.8520710059172, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=23.0113636363636, Blast_Score=77, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71982858, Length=263, Percent_Identity=24.7148288973384, Blast_Score=77, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71987143, Length=351, Percent_Identity=23.3618233618234, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17553716, Length=353, Percent_Identity=23.7960339943343, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17510307, Length=377, Percent_Identity=24.4031830238727, Blast_Score=73, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71995514, Length=350, Percent_Identity=24.8571428571429, Blast_Score=73, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17510309, Length=377, Percent_Identity=24.4031830238727, Blast_Score=73, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17509811, Length=349, Percent_Identity=21.7765042979943, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17505370, Length=358, Percent_Identity=20.9497206703911, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17552642, Length=392, Percent_Identity=23.2142857142857, Blast_Score=66, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323844, Length=527, Percent_Identity=35.673624288425, Blast_Score=311, Evalue=3e-85, Organism=Saccharomyces cerevisiae, GI6320224, Length=342, Percent_Identity=24.2690058479532, Blast_Score=101, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=24.9299719887955, Blast_Score=94, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6324217, Length=340, Percent_Identity=25.8823529411765, Blast_Score=85, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6322427, Length=356, Percent_Identity=23.876404494382, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=22.3463687150838, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321856, Length=337, Percent_Identity=23.1454005934718, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323021, Length=389, Percent_Identity=23.6503856041131, Blast_Score=71, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6325138, Length=150, Percent_Identity=28.6666666666667, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324778, Length=250, Percent_Identity=25.2, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320119, Length=261, Percent_Identity=25.2873563218391, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24646066, Length=648, Percent_Identity=32.8703703703704, Blast_Score=339, Evalue=5e-93, Organism=Drosophila melanogaster, GI24664226, Length=424, Percent_Identity=34.4339622641509, Blast_Score=263, Evalue=4e-70, Organism=Drosophila melanogaster, GI24664230, Length=427, Percent_Identity=34.4262295081967, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI62472181, Length=427, Percent_Identity=34.4262295081967, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI21358123, Length=363, Percent_Identity=37.465564738292, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24642822, Length=361, Percent_Identity=24.6537396121884, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI24584399, Length=337, Percent_Identity=22.8486646884273, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI28571808, Length=366, Percent_Identity=21.8579234972678, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI28571809, Length=366, Percent_Identity=21.8579234972678, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI17977678, Length=335, Percent_Identity=22.6865671641791, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI18857967, Length=357, Percent_Identity=24.6498599439776, Blast_Score=76, Evalue=8e-14, Organism=Drosophila melanogaster, GI21355559, Length=438, Percent_Identity=23.7442922374429, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=23.2375979112272, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581954, Length=193, Percent_Identity=25.3886010362694, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI24581952, Length=193, Percent_Identity=25.3886010362694, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI24581956, Length=193, Percent_Identity=25.3886010362694, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI24645031, Length=350, Percent_Identity=21.4285714285714, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=23.1638418079096, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642151, Length=360, Percent_Identity=23.3333333333333, Blast_Score=71, Evalue=4e-12, Organism=Drosophila melanogaster, GI24585582, Length=341, Percent_Identity=22.2873900293255, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574962, Length=342, Percent_Identity=24.5614035087719, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24666101, Length=343, Percent_Identity=22.7405247813411, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24644483, Length=342, Percent_Identity=23.0994152046784, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI281361218, Length=342, Percent_Identity=23.0994152046784, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI24644481, Length=342, Percent_Identity=23.0994152046784, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI24644487, Length=342, Percent_Identity=23.0994152046784, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI45551833, Length=342, Percent_Identity=23.0994152046784, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI24644485, Length=342, Percent_Identity=23.0994152046784, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI17136814, Length=379, Percent_Identity=21.3720316622691, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24644479, Length=342, Percent_Identity=23.0994152046784, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=22.6415094339623, Blast_Score=69, Evalue=2e-11, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=22.0108695652174, Blast_Score=69, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004589 - InterPro: IPR006293 - InterPro: IPR002121 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR010997 - InterPro: IPR018982 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF00570 HRDC; PF09382 RQC [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 94489; Mature: 94489
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS50967 HRDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLLEILSKYYGYTSFRKGQESIINSILSEKDVLAIMPTGGGKSICYQIPALILDGMT CCHHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHH IVISPLISLMKDQVDALKTMGISAAFINSSLSSKEFNEILNNIRKNNYKILYIAPERLDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCH QEFIELINNNNVSQVAIDEAHCVSQWGHDFRLSYRRISDFIKNLPKRPIVTAFTATASEE HHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH VRTDIINLLYLENPDYYITGFDRENLSINIVKSSSKNKYILDYIQNHKNESGIIYVATRK HHHHHHHEEEEECCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEHH EVENISNGLSKRNISVSKYHAGLSKNERSKNQEDFINDNVDIMVATNAFGMGIDKPNIRW HHHHHHCCHHHCCCCHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCEEE VIHYNMPQSIENYYQEIGRAGRDGEKSECVLLFSPGDVHIQKYLIDIGVENPERKLFQHK EEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHH KLQYMIDLVYSNSCYRKTILSYFGENYIDNCNNCSNCLVEGEIVDKTIDAQKVISCVARM HHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCHHHCEEECHHHHHHCCHHHHHHHHHHH KRSYGVTTIVDVLRGSKNKKILQLGLNTLSTYNIMRDYSSEDLKNFVNTLVSHGFLDLVE HHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TLGNGNRGSFPTIRLNEMSMKVLKGEVKVEFKEIVMTKSLEVEDELYNALRELRHSIASE HHCCCCCCCCCEEEEHHHHHHHHHHHHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC ERIAPYMVFGDGTLRAMSSSYPINKEEMLDISGVGEIKYQKYGRDFEAVIKEYVEKNNIN CCCCCEEEECCCHHHHHCCCCCCCHHHEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCC KKIDEKNVDSKNVNSDFLEVNTDKVLYEKLLVIREEYATKEKLPAYMILANKALKEISGR CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCC YPLDEEQLKDISGIGGVKFEKYGASILAEVNKYVKENNINVIWEKKGKRKLILDGESRKN CCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCC NEIALDLLNQGKDIQSISQEIEVSLSTIIGYVHDYVKDGHSISFELGLENFYNEDKKKMI CCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCHHHHHHH LEVCEKVGYDNLNNIKRKLPDSIKYENIRAVILDSYLENLKNNIIAE HHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKKLLEILSKYYGYTSFRKGQESIINSILSEKDVLAIMPTGGGKSICYQIPALILDGMT CCHHHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHH IVISPLISLMKDQVDALKTMGISAAFINSSLSSKEFNEILNNIRKNNYKILYIAPERLDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCH QEFIELINNNNVSQVAIDEAHCVSQWGHDFRLSYRRISDFIKNLPKRPIVTAFTATASEE HHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH VRTDIINLLYLENPDYYITGFDRENLSINIVKSSSKNKYILDYIQNHKNESGIIYVATRK HHHHHHHEEEEECCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEHH EVENISNGLSKRNISVSKYHAGLSKNERSKNQEDFINDNVDIMVATNAFGMGIDKPNIRW HHHHHHCCHHHCCCCHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCEEE VIHYNMPQSIENYYQEIGRAGRDGEKSECVLLFSPGDVHIQKYLIDIGVENPERKLFQHK EEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHH KLQYMIDLVYSNSCYRKTILSYFGENYIDNCNNCSNCLVEGEIVDKTIDAQKVISCVARM HHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCHHHCEEECHHHHHHCCHHHHHHHHHHH KRSYGVTTIVDVLRGSKNKKILQLGLNTLSTYNIMRDYSSEDLKNFVNTLVSHGFLDLVE HHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TLGNGNRGSFPTIRLNEMSMKVLKGEVKVEFKEIVMTKSLEVEDELYNALRELRHSIASE HHCCCCCCCCCEEEEHHHHHHHHHHHHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC ERIAPYMVFGDGTLRAMSSSYPINKEEMLDISGVGEIKYQKYGRDFEAVIKEYVEKNNIN CCCCCEEEECCCHHHHHCCCCCCCHHHEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCC KKIDEKNVDSKNVNSDFLEVNTDKVLYEKLLVIREEYATKEKLPAYMILANKALKEISGR CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCC YPLDEEQLKDISGIGGVKFEKYGASILAEVNKYVKENNINVIWEKKGKRKLILDGESRKN CCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCC NEIALDLLNQGKDIQSISQEIEVSLSTIIGYVHDYVKDGHSISFELGLENFYNEDKKKMI CCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCHHHHHHH LEVCEKVGYDNLNNIKRKLPDSIKYENIRAVILDSYLENLKNNIIAE HHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9642195 [H]