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The map label for this gene is ytfH [C]

Identifier: 126699280

GI number: 126699280

Start: 1951254

End: 1951586

Strand: Direct

Name: ytfH [C]

Synonym: CD1675

Alternate gene names: 126699280

Gene position: 1951254-1951586 (Clockwise)

Preceding gene: 126699278

Following gene: 126699288

Centisome position: 45.48

GC content: 29.43

Gene sequence:

>333_bases
ATGAGTATAGACTGTATATCAAATACAGATTTAAGTGAAACAGGATTTAGTTATACACTTTCACTGATTAGTGGTAAATA
TAAGATGATAATTCTTTACTGTCTTGTAGAATTTGAAGTTGTAAGATATAATGCATTAAAACGTTATATAAATACTATCT
CCTATAAAACTTTGAGTTTATCATTAAAAGAATTAGAAGCAGATAACTTGATTATTCGTACTGAATATCCTCAAATACCT
CCTAAGGTAGAATATAGTCTATCAGAAAGGGGAAAATCTCTGATTCCAATTTTAGATGCAATGTGTGAGTGGGGAGAGAG
GAATAGACCTTAA

Upstream 100 bases:

>100_bases
TGACTTTCAATTATTCTTACACTATAATTTTATTATAAATTATTCTAAAAACAAGTACGCACATTTTTGTTCAATACTAA
CCAAAAGGAGAGTGTAATAT

Downstream 100 bases:

>100_bases
TTTTGTATCTGTAGATACCATAAAAAGACTGTGAGTAAAATTGTTTGAATAATCTACTCACAGTCTATATTTAAATTAAT
AGTTAGTATTTTTAATTTAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSIDCISNTDLSETGFSYTLSLISGKYKMIILYCLVEFEVVRYNALKRYINTISYKTLSLSLKELEADNLIIRTEYPQIP
PKVEYSLSERGKSLIPILDAMCEWGERNRP

Sequences:

>Translated_110_residues
MSIDCISNTDLSETGFSYTLSLISGKYKMIILYCLVEFEVVRYNALKRYINTISYKTLSLSLKELEADNLIIRTEYPQIP
PKVEYSLSERGKSLIPILDAMCEWGERNRP
>Mature_109_residues
SIDCISNTDLSETGFSYTLSLISGKYKMIILYCLVEFEVVRYNALKRYINTISYKTLSLSLKELEADNLIIRTEYPQIPP
KVEYSLSERGKSLIPILDAMCEWGERNRP

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=92, Percent_Identity=35.8695652173913, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12709; Mature: 12578

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDCISNTDLSETGFSYTLSLISGKYKMIILYCLVEFEVVRYNALKRYINTISYKTLSL
CCCCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKELEADNLIIRTEYPQIPPKVEYSLSERGKSLIPILDAMCEWGERNRP
HHHHCCCCCEEEEECCCCCCCCEEECHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIDCISNTDLSETGFSYTLSLISGKYKMIILYCLVEFEVVRYNALKRYINTISYKTLSL
CCCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKELEADNLIIRTEYPQIPPKVEYSLSERGKSLIPILDAMCEWGERNRP
HHHHCCCCCEEEEECCCCCCCCEEECHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]