| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699260
Identifier: 126699260
GI number: 126699260
Start: 1921421
End: 1921936
Strand: Direct
Name: 126699260
Synonym: CD1656
Alternate gene names: NA
Gene position: 1921421-1921936 (Clockwise)
Preceding gene: 126699259
Following gene: 126699261
Centisome position: 44.79
GC content: 27.33
Gene sequence:
>516_bases ATGGAAAAATATATATGGTTGTTTCCATTACTTTTTATTTTTCATGATATGGAAGAGATAATAGGTTTTGGAATATGGCT TAAAAAAAATAAATCAATGCTTGATAAGAAGTATCCATTTATCAGTAAAATTTATGAAAATTATAGTACCGAAGGCATGG CATTTGCTGTGTTTGAAGAATTTATTTTATGCATTATTTTCTGTATACTTACAGTTATAACAGAGAATCAGTATGTATAT CTACTATGGTTAGGTAGTTTTATAGCATATACCTTACATTTGGTAATTCATATAGGGCAGTCAATCATAATAAGAAAATA TATACCTTCACTTATTACCAGTATCATATGCTTACCAATAAGCATTTGGTGTATAAGTAAGAGTATTTATATAGTTGATT GTGAAATGAGTACAACAATTCTGTACAGTATAATTGGCATTATAATTGTAGCATTGAATTTAAAGTTTGCACAGTCGCTG ATTGGAAAATTTACAAAGTGGATGTCAAACATATAA
Upstream 100 bases:
>100_bases ATATGTATTTTTACTAAGACGGAAATGAAATAATTAAACCATTAAATAATATTATAAGATGATGAATAAGTAGATAAATC AAATTTTGTAGGAGGATATT
Downstream 100 bases:
>100_bases ATTTTAGTTTATTGGACAGTTCAAGGAATCAGAAATTGGAATTTTATAGTATTAATATTTTATAGTATTAATATAATGTA TAAAATTTTATAGCAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKIYENYSTEGMAFAVFEEFILCIIFCILTVITENQYVY LLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPISIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSL IGKFTKWMSNI
Sequences:
>Translated_171_residues MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKIYENYSTEGMAFAVFEEFILCIIFCILTVITENQYVY LLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPISIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSL IGKFTKWMSNI >Mature_171_residues MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKIYENYSTEGMAFAVFEEFILCIIFCILTVITENQYVY LLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPISIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSL IGKFTKWMSNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19981; Mature: 19981
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKIYENYSTEGMAFAVFEE CCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH FILCIIFCILTVITENQYVYLLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPI HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSLIGKFTKWMSNI HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKYIWLFPLLFIFHDMEEIIGFGIWLKKNKSMLDKKYPFISKIYENYSTEGMAFAVFEE CCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH FILCIIFCILTVITENQYVYLLWLGSFIAYTLHLVIHIGQSIIIRKYIPSLITSIICLPI HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIWCISKSIYIVDCEMSTTILYSIIGIIIVALNLKFAQSLIGKFTKWMSNI HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA