Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699247

Identifier: 126699247

GI number: 126699247

Start: 1905390

End: 1906181

Strand: Direct

Name: 126699247

Synonym: CD1643

Alternate gene names: NA

Gene position: 1905390-1906181 (Clockwise)

Preceding gene: 126699246

Following gene: 126699249

Centisome position: 44.41

GC content: 24.37

Gene sequence:

>792_bases
ATGATTGTTTTTTCAGATTTAGACAGGAGTATCATTTACTCCAATAAATTTTTAAATGCTGATAGTAAATATGCTAATAT
AGAAATTTATAGGGAAAAAGAAATATCTTATATATCTTTAGATACTATAAATTTAATAAAGCAAATACAATATTATGGTA
TGTTTATACCTACAACTACTAGAACAGTGGAGCAATTTAAGCGTATAGAATTTAATAAATATGGGATTTATTTTCCTTGG
AGTATAACTTCAAATGGAGGAGTTATACTTAAAGATAATGAAATATTGAAATCATGGAGTGAAAAAATAGATAAACTAAA
ATCTAATTATGAGCCCATTGAAAGTATGATTCATAAATTTAAAGACTATTTGAATGTAGATGGAATAACTAATTTTAAAG
TTGCAGAAGATACATTTTTTTATATAGTTGTTGATTTATCAAGATTTAATTTGGATTCAATCAAAGAATATACAAATATA
TTGGAATCAAAAAATTGGAAGTTTTATGTGAGTGGCAGAAAAATATATTTTATACCAAAAGAAATTTCAAAAGAAAATGC
TATAAAATACTTGACTAAAGAATTAGGAATAGAATATTTTTATGCAGTTGGAGATTCTATTATGGACTATGGCATGCTTA
ATATCTCAAATAAATCCTATGTATTGAAGCATGGTGATATAAATAAAAATGAAATAGAAAATTCATTTATATCAAGTTCT
TTCAATGGAATGAGTGGAACTGAAGAGATACTATCTAACATTTTAGACGAGAACTGCCTACTTAATATATAA

Upstream 100 bases:

>100_bases
TGTTGAAGTTGAACAAATGGATTTAAAAGCCTATAAATGTTGTGGAATAATAAAAAATATGAAAGATATTTAGGAAATAT
ATTAGACAGGAGAATATTGA

Downstream 100 bases:

>100_bases
TGACTGATATATAAATAATAAACTAGAAAAATCTGAAATAAATTATAGTAAAGTTTATCATACTAATTTATTTCAGATTT
TTATCAATTTATATTTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIVFSDLDRSIIYSNKFLNADSKYANIEIYREKEISYISLDTINLIKQIQYYGMFIPTTTRTVEQFKRIEFNKYGIYFPW
SITSNGGVILKDNEILKSWSEKIDKLKSNYEPIESMIHKFKDYLNVDGITNFKVAEDTFFYIVVDLSRFNLDSIKEYTNI
LESKNWKFYVSGRKIYFIPKEISKENAIKYLTKELGIEYFYAVGDSIMDYGMLNISNKSYVLKHGDINKNEIENSFISSS
FNGMSGTEEILSNILDENCLLNI

Sequences:

>Translated_263_residues
MIVFSDLDRSIIYSNKFLNADSKYANIEIYREKEISYISLDTINLIKQIQYYGMFIPTTTRTVEQFKRIEFNKYGIYFPW
SITSNGGVILKDNEILKSWSEKIDKLKSNYEPIESMIHKFKDYLNVDGITNFKVAEDTFFYIVVDLSRFNLDSIKEYTNI
LESKNWKFYVSGRKIYFIPKEISKENAIKYLTKELGIEYFYAVGDSIMDYGMLNISNKSYVLKHGDINKNEIENSFISSS
FNGMSGTEEILSNILDENCLLNI
>Mature_263_residues
MIVFSDLDRSIIYSNKFLNADSKYANIEIYREKEISYISLDTINLIKQIQYYGMFIPTTTRTVEQFKRIEFNKYGIYFPW
SITSNGGVILKDNEILKSWSEKIDKLKSNYEPIESMIHKFKDYLNVDGITNFKVAEDTFFYIVVDLSRFNLDSIKEYTNI
LESKNWKFYVSGRKIYFIPKEISKENAIKYLTKELGIEYFYAVGDSIMDYGMLNISNKSYVLKHGDINKNEIENSFISSS
FNGMSGTEEILSNILDENCLLNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30804; Mature: 30804

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFSDLDRSIIYSNKFLNADSKYANIEIYREKEISYISLDTINLIKQIQYYGMFIPTTT
CEEECCCCCEEEECCCEECCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHEEEECCCH
RTVEQFKRIEFNKYGIYFPWSITSNGGVILKDNEILKSWSEKIDKLKSNYEPIESMIHKF
HHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHH
KDYLNVDGITNFKVAEDTFFYIVVDLSRFNLDSIKEYTNILESKNWKFYVSGRKIYFIPK
HHHHCCCCCCCEEEECCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEECH
EISKENAIKYLTKELGIEYFYAVGDSIMDYGMLNISNKSYVLKHGDINKNEIENSFISSS
HCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCEEEECCCEEEEECCCCCHHHHHHHHHHCC
FNGMSGTEEILSNILDENCLLNI
CCCCCCHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MIVFSDLDRSIIYSNKFLNADSKYANIEIYREKEISYISLDTINLIKQIQYYGMFIPTTT
CEEECCCCCEEEECCCEECCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHEEEECCCH
RTVEQFKRIEFNKYGIYFPWSITSNGGVILKDNEILKSWSEKIDKLKSNYEPIESMIHKF
HHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHH
KDYLNVDGITNFKVAEDTFFYIVVDLSRFNLDSIKEYTNILESKNWKFYVSGRKIYFIPK
HHHHCCCCCCCEEEECCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEECH
EISKENAIKYLTKELGIEYFYAVGDSIMDYGMLNISNKSYVLKHGDINKNEIENSFISSS
HCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCEEEECCCEEEEECCCCCHHHHHHHHHHCC
FNGMSGTEEILSNILDENCLLNI
CCCCCCHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA