| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699246
Identifier: 126699246
GI number: 126699246
Start: 1904274
End: 1905362
Strand: Direct
Name: 126699246
Synonym: CD1642
Alternate gene names: NA
Gene position: 1904274-1905362 (Clockwise)
Preceding gene: 126699244
Following gene: 126699247
Centisome position: 44.39
GC content: 27.27
Gene sequence:
>1089_bases ATGAGAGATTTTAGCACGTATTCTAAAGATGATGTTATTTTTTTATTAAAAGATATATCAAATTTAATTGAAGAAGAAGG AAATAAAGAAAGAGAATTAAAAATACAAAATGGTAGACATTATTCAGAAATGATACCAATAGAGTATGAAGTTAGTGAAG ATTATCTGAATTTATATCATGAGAAACTAAGAGAAAATAAAGATAAACTTGCATTTTCTATAGGAGTTATGTGTGAAAAA ATAATTAAAAAAAATGGAAATGATGTAGTACTAGTTTCACTTGCTAGAGCAGGAACACCTATTGGTATTTTGGCAAAAAG ATATATAAGAAGCAAGTATAATATAAGTTTACCCCACTATACAATCTCTATAATAAGAGATAAGGGAATAGATATGAATG CAATTGAATATATAGTAAAGAATCATCCGAGCTCAAAAATTCAATTTTTAGATGGATGGACTGGTAAAGGAACTATATCA AAAGAACTTGAAAAAGCATGTAATGAACTTAATGTTAAATTTAAAAAACATTTTGACTCAACACTTGCTGTATTAGCTGA CCCTGCTGGATATTCAGGACTTTATGGAATTAGAGAAGATTTCTTAATACCAAGTGCATGTTTAAATTCAACCGTTTCTG GTTTAGTAAGTAGAACTGTACTAAGAGAGGATTTAATTGGTAAAAATGACTTTCATGGAGCTAAGTTTTATAGACATTTA AAAGATAAAGATGAATCTATGAACTATATCGAAACTATAGAAGAATGTTTTAAAAATCAATTTAAGAATATATCTGATGA AGTTGAAAACTGGGAAAGCGACATTATAACAAGAGATGGATACTTTGATGTTTTAAATATAAAAGAAAAGTATAACATAA CAGATATTAACTTTATCAAACCAGGTGTAGGGGAAACGACAAGGGTTTTACTTAGAAGAGTTCCGTATAAGATTCTTGTT AAAGACTTAAATGATAAATCTTTAGACCATATATTCATATTAGCTAAGGAGAAAAATGTTGAAGTTGAACAAATGGATTT AAAAGCCTATAAATGTTGTGGAATAATAAAAAATATGAAAGATATTTAG
Upstream 100 bases:
>100_bases TTAAAAAAACAAGTATAAAAGAATTAACTATAGTATGTTGTAGCTAAAGTGTTTTAACAGGATAAAATATATCACGATTT TAAGATAGGAGTTGAGTCAT
Downstream 100 bases:
>100_bases GAAATATATTAGACAGGAGAATATTGAATGATTGTTTTTTCAGATTTAGACAGGAGTATCATTTACTCCAATAAATTTTT AAATGCTGATAGTAAATATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MRDFSTYSKDDVIFLLKDISNLIEEEGNKERELKIQNGRHYSEMIPIEYEVSEDYLNLYHEKLRENKDKLAFSIGVMCEK IIKKNGNDVVLVSLARAGTPIGILAKRYIRSKYNISLPHYTISIIRDKGIDMNAIEYIVKNHPSSKIQFLDGWTGKGTIS KELEKACNELNVKFKKHFDSTLAVLADPAGYSGLYGIREDFLIPSACLNSTVSGLVSRTVLREDLIGKNDFHGAKFYRHL KDKDESMNYIETIEECFKNQFKNISDEVENWESDIITRDGYFDVLNIKEKYNITDINFIKPGVGETTRVLLRRVPYKILV KDLNDKSLDHIFILAKEKNVEVEQMDLKAYKCCGIIKNMKDI
Sequences:
>Translated_362_residues MRDFSTYSKDDVIFLLKDISNLIEEEGNKERELKIQNGRHYSEMIPIEYEVSEDYLNLYHEKLRENKDKLAFSIGVMCEK IIKKNGNDVVLVSLARAGTPIGILAKRYIRSKYNISLPHYTISIIRDKGIDMNAIEYIVKNHPSSKIQFLDGWTGKGTIS KELEKACNELNVKFKKHFDSTLAVLADPAGYSGLYGIREDFLIPSACLNSTVSGLVSRTVLREDLIGKNDFHGAKFYRHL KDKDESMNYIETIEECFKNQFKNISDEVENWESDIITRDGYFDVLNIKEKYNITDINFIKPGVGETTRVLLRRVPYKILV KDLNDKSLDHIFILAKEKNVEVEQMDLKAYKCCGIIKNMKDI >Mature_362_residues MRDFSTYSKDDVIFLLKDISNLIEEEGNKERELKIQNGRHYSEMIPIEYEVSEDYLNLYHEKLRENKDKLAFSIGVMCEK IIKKNGNDVVLVSLARAGTPIGILAKRYIRSKYNISLPHYTISIIRDKGIDMNAIEYIVKNHPSSKIQFLDGWTGKGTIS KELEKACNELNVKFKKHFDSTLAVLADPAGYSGLYGIREDFLIPSACLNSTVSGLVSRTVLREDLIGKNDFHGAKFYRHL KDKDESMNYIETIEECFKNQFKNISDEVENWESDIITRDGYFDVLNIKEKYNITDINFIKPGVGETTRVLLRRVPYKILV KDLNDKSLDHIFILAKEKNVEVEQMDLKAYKCCGIIKNMKDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41766; Mature: 41766
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFSTYSKDDVIFLLKDISNLIEEEGNKERELKIQNGRHYSEMIPIEYEVSEDYLNLYH CCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEEEECCHHHHHHHH EKLRENKDKLAFSIGVMCEKIIKKNGNDVVLVSLARAGTPIGILAKRYIRSKYNISLPHY HHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCE TISIIRDKGIDMNAIEYIVKNHPSSKIQFLDGWTGKGTISKELEKACNELNVKFKKHFDS EEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHCH TLAVLADPAGYSGLYGIREDFLIPSACLNSTVSGLVSRTVLREDLIGKNDFHGAKFYRHL HHHEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KDKDESMNYIETIEECFKNQFKNISDEVENWESDIITRDGYFDVLNIKEKYNITDINFIK HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCEECCCCEEEEECHHHCCCCEEEEEC PGVGETTRVLLRRVPYKILVKDLNDKSLDHIFILAKEKNVEVEQMDLKAYKCCGIIKNMK CCCCHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC DI CC >Mature Secondary Structure MRDFSTYSKDDVIFLLKDISNLIEEEGNKERELKIQNGRHYSEMIPIEYEVSEDYLNLYH CCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCEEEECCHHHHHHHH EKLRENKDKLAFSIGVMCEKIIKKNGNDVVLVSLARAGTPIGILAKRYIRSKYNISLPHY HHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCE TISIIRDKGIDMNAIEYIVKNHPSSKIQFLDGWTGKGTISKELEKACNELNVKFKKHFDS EEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHCH TLAVLADPAGYSGLYGIREDFLIPSACLNSTVSGLVSRTVLREDLIGKNDFHGAKFYRHL HHHEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KDKDESMNYIETIEECFKNQFKNISDEVENWESDIITRDGYFDVLNIKEKYNITDINFIK HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCEECCCCEEEEECHHHCCCCEEEEEC PGVGETTRVLLRRVPYKILVKDLNDKSLDHIFILAKEKNVEVEQMDLKAYKCCGIIKNMK CCCCHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC DI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA