| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yceG [H]
Identifier: 126699242
GI number: 126699242
Start: 1899165
End: 1900727
Strand: Direct
Name: yceG [H]
Synonym: CD1638
Alternate gene names: 126699242
Gene position: 1899165-1900727 (Clockwise)
Preceding gene: 126699241
Following gene: 126699243
Centisome position: 44.27
GC content: 26.3
Gene sequence:
>1563_bases ATGGGTGACTCAAAGGTATTTGAAAAAATATTCTCCAGCCAATCAGATAGAGGAAATTACACTCCTTCAAAGGGATATCT AAGTTATTTTATTTCGTATATTGGTTTAGAAGATGAAGTTTTGTACAATCTCGAGATATTTAAGACAAAACAAAATATTG ATAGCAAAAAAGATATTGCTTTATTTACTGATGTTATAGCAAATCCTAGTGATTTTGATATTATAAATTATTTTAAAAGT GGACTTCAAAAATATAGAACTAGCATGGAAGATGTAGATATAAATATTTTGGGATTTGAAGATATTGATTATAAAATAAA GCAAGCAATGGATAGAGTGTTAAAAGAAGAGGAAAAAGAATTTACTAATGATAGAGTTAAACAAAATTTTATAGTGAAAA TAATGGCATGGATAAAAATTTATATCGGTGCTTTAGATATAAATAAAAATGAAGCTCCAAAAGTAATATTTTATGGAGAT ATAAAAAAACATGAAGTTTATTTACTCTTAATATTATACTTGGCAGGTTTTGATGTTTTATATCTTAATCCAAATTCAAA GAGTAATATAGATATTTTAAAATCAGAAAGATACAATATAGAGTTTGAAGAAGCCAACATAATAGAAGAAAAAATTTCTT TTGAAGAAAGGGTTATTTTAGGGGAAAAAATAGATAAAAGTTCTGTAAAAAAAGCTTTTACTGTTGGGGCAGAAGCATCA AAGCGTATAAGTGAGGAATTGTTAAATGATGCAGGATTTATAAAACCTTGGCAACTCCAAGATAGAAAAATAAAAAATCT ACTTCTAAGTTCAACTGTTGATGAAATATCAATATACTGGAATCAACCACTTAAATTAAGACCAGGATTTAAGTTTAATG ATGCTATTGTAGAAGCTCCAAATTTTCTTTCTAAGATTAATGGAATATATAACGATAAGAATGAATATATTAAGTTTTTA GATTTATTAAGAGATTCGGAAAGTTCAACATTTATTGAATTTAATGGAGATGTAGATAGATTTTCAAAAGCTTTTACAAG AGAAGCTTTTAGTTTATCCTTTTTATTGGATTCAAAAGGTGCAATAGATAAAAACTCTGTTTTAAATAATAAAGATTATT CCATATCAACACTAGCATTGAATCAACAAATTATGATTTTAGAGAAAGTGGAAGAGTTGTTAGAAGGAAGTATGTTTTTG AATGGTTTAAGTGGAGAAGACAAGATAAAAGGTCTATTTACAGTACTTCACATGGATAAGAAATTTGTTCATATGATGAA CAATTTCGATTACTCACTTATAAACCCAAAATTGATTATATACATGTACAAGAGTATTGTATTTGATAAAGAAATAGTTT TTCTTATGCTTTTACTTAGTAAGATTGGATTTGATATTATCATATTATGTCCAGGAGGAGAAAACAATATAGAGAATGTT ATAAATAACCAATTGATTGATGTACACAGATTGGATAAAATGGTATATGACCTTAAATTAAATTCGCTTGAAAATGATAT ACCTTTACTTAAAAAAATTTTTGGAAAGAGGAGACGATTTTAG
Upstream 100 bases:
>100_bases AAAAGACTGCTTAAAACAAATTTTTTAGAAGAAAACAGACTGACTCAAAATATGAATTTTGGGTCAGTTCTGAATAAACA TTTAAATTGGGAGGATAGTT
Downstream 100 bases:
>100_bases ATGGGGATAAATATAAATAGTTTTTCAAAAGATAAGAACTCTGTAGAGGTTACTGAGAATTTGCCTACAGCAGTTCAAGA AGAAAACTTCGATATAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MGDSKVFEKIFSSQSDRGNYTPSKGYLSYFISYIGLEDEVLYNLEIFKTKQNIDSKKDIALFTDVIANPSDFDIINYFKS GLQKYRTSMEDVDINILGFEDIDYKIKQAMDRVLKEEEKEFTNDRVKQNFIVKIMAWIKIYIGALDINKNEAPKVIFYGD IKKHEVYLLLILYLAGFDVLYLNPNSKSNIDILKSERYNIEFEEANIIEEKISFEERVILGEKIDKSSVKKAFTVGAEAS KRISEELLNDAGFIKPWQLQDRKIKNLLLSSTVDEISIYWNQPLKLRPGFKFNDAIVEAPNFLSKINGIYNDKNEYIKFL DLLRDSESSTFIEFNGDVDRFSKAFTREAFSLSFLLDSKGAIDKNSVLNNKDYSISTLALNQQIMILEKVEELLEGSMFL NGLSGEDKIKGLFTVLHMDKKFVHMMNNFDYSLINPKLIIYMYKSIVFDKEIVFLMLLLSKIGFDIIILCPGGENNIENV INNQLIDVHRLDKMVYDLKLNSLENDIPLLKKIFGKRRRF
Sequences:
>Translated_520_residues MGDSKVFEKIFSSQSDRGNYTPSKGYLSYFISYIGLEDEVLYNLEIFKTKQNIDSKKDIALFTDVIANPSDFDIINYFKS GLQKYRTSMEDVDINILGFEDIDYKIKQAMDRVLKEEEKEFTNDRVKQNFIVKIMAWIKIYIGALDINKNEAPKVIFYGD IKKHEVYLLLILYLAGFDVLYLNPNSKSNIDILKSERYNIEFEEANIIEEKISFEERVILGEKIDKSSVKKAFTVGAEAS KRISEELLNDAGFIKPWQLQDRKIKNLLLSSTVDEISIYWNQPLKLRPGFKFNDAIVEAPNFLSKINGIYNDKNEYIKFL DLLRDSESSTFIEFNGDVDRFSKAFTREAFSLSFLLDSKGAIDKNSVLNNKDYSISTLALNQQIMILEKVEELLEGSMFL NGLSGEDKIKGLFTVLHMDKKFVHMMNNFDYSLINPKLIIYMYKSIVFDKEIVFLMLLLSKIGFDIIILCPGGENNIENV INNQLIDVHRLDKMVYDLKLNSLENDIPLLKKIFGKRRRF >Mature_519_residues GDSKVFEKIFSSQSDRGNYTPSKGYLSYFISYIGLEDEVLYNLEIFKTKQNIDSKKDIALFTDVIANPSDFDIINYFKSG LQKYRTSMEDVDINILGFEDIDYKIKQAMDRVLKEEEKEFTNDRVKQNFIVKIMAWIKIYIGALDINKNEAPKVIFYGDI KKHEVYLLLILYLAGFDVLYLNPNSKSNIDILKSERYNIEFEEANIIEEKISFEERVILGEKIDKSSVKKAFTVGAEASK RISEELLNDAGFIKPWQLQDRKIKNLLLSSTVDEISIYWNQPLKLRPGFKFNDAIVEAPNFLSKINGIYNDKNEYIKFLD LLRDSESSTFIEFNGDVDRFSKAFTREAFSLSFLLDSKGAIDKNSVLNNKDYSISTLALNQQIMILEKVEELLEGSMFLN GLSGEDKIKGLFTVLHMDKKFVHMMNNFDYSLINPKLIIYMYKSIVFDKEIVFLMLLLSKIGFDIIILCPGGENNIENVI NNQLIDVHRLDKMVYDLKLNSLENDIPLLKKIFGKRRRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60293; Mature: 60162
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSKVFEKIFSSQSDRGNYTPSKGYLSYFISYIGLEDEVLYNLEIFKTKQNIDSKKDIA CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHH LFTDVIANPSDFDIINYFKSGLQKYRTSMEDVDINILGFEDIDYKIKQAMDRVLKEEEKE HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHH FTNDRVKQNFIVKIMAWIKIYIGALDINKNEAPKVIFYGDIKKHEVYLLLILYLAGFDVL HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEE YLNPNSKSNIDILKSERYNIEFEEANIIEEKISFEERVILGEKIDKSSVKKAFTVGAEAS EECCCCCCCCEEEECCCCEEEEHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCHHH KRISEELLNDAGFIKPWQLQDRKIKNLLLSSTVDEISIYWNQPLKLRPGFKFNDAIVEAP HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHEEEEECCCEEECCCCCCCCHHHCCH NFLSKINGIYNDKNEYIKFLDLLRDSESSTFIEFNGDVDRFSKAFTREAFSLSFLLDSKG HHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHEEEEEECCCC AIDKNSVLNNKDYSISTLALNQQIMILEKVEELLEGSMFLNGLSGEDKIKGLFTVLHMDK CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHH KFVHMMNNFDYSLINPKLIIYMYKSIVFDKEIVFLMLLLSKIGFDIIILCPGGENNIENV HHHHHHHCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH INNQLIDVHRLDKMVYDLKLNSLENDIPLLKKIFGKRRRF HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GDSKVFEKIFSSQSDRGNYTPSKGYLSYFISYIGLEDEVLYNLEIFKTKQNIDSKKDIA CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHH LFTDVIANPSDFDIINYFKSGLQKYRTSMEDVDINILGFEDIDYKIKQAMDRVLKEEEKE HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHH FTNDRVKQNFIVKIMAWIKIYIGALDINKNEAPKVIFYGDIKKHEVYLLLILYLAGFDVL HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEE YLNPNSKSNIDILKSERYNIEFEEANIIEEKISFEERVILGEKIDKSSVKKAFTVGAEAS EECCCCCCCCEEEECCCCEEEEHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCHHH KRISEELLNDAGFIKPWQLQDRKIKNLLLSSTVDEISIYWNQPLKLRPGFKFNDAIVEAP HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHEEEEECCCEEECCCCCCCCHHHCCH NFLSKINGIYNDKNEYIKFLDLLRDSESSTFIEFNGDVDRFSKAFTREAFSLSFLLDSKG HHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHEEEEEECCCC AIDKNSVLNNKDYSISTLALNQQIMILEKVEELLEGSMFLNGLSGEDKIKGLFTVLHMDK CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHH KFVHMMNNFDYSLINPKLIIYMYKSIVFDKEIVFLMLLLSKIGFDIIILCPGGENNIENV HHHHHHHCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH INNQLIDVHRLDKMVYDLKLNSLENDIPLLKKIFGKRRRF HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]