| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yceH [H]
Identifier: 126699243
GI number: 126699243
Start: 1900728
End: 1901864
Strand: Direct
Name: yceH [H]
Synonym: CD1639
Alternate gene names: 126699243
Gene position: 1900728-1901864 (Clockwise)
Preceding gene: 126699242
Following gene: 126699244
Centisome position: 44.3
GC content: 28.58
Gene sequence:
>1137_bases ATGGGGATAAATATAAATAGTTTTTCAAAAGATAAGAACTCTGTAGAGGTTACTGAGAATTTGCCTACAGCAGTTCAAGA AGAAAACTTCGATATAATGGAATATACAAATAATAAAAAAAATGAACTGAGAAAGTCTAAGGAAGTTGAGGCATTGACAT CCCTTATAGAAGTAGAAAATCCAGATACGATTTTACAGTTTGGTAGGAAAGCATCTGAAGGAGTAGCAAGAGTTTCTGAT AGCCTTTTAAATACAATAAAATTAAATAGAAATGAAGAAAATTCTAAAATGCTGGTTCATTTAACTAAAATAATGGACAA GTTTGATTTAGACGATTTTCAAGAAACTAAGGAACCAAATTTCGTTCAAAAACTTTTCAAAAAAGCTAATAATGCCATTG AAATGATGTTTCAAAAGTATGAAACATTGGGAGGAGAAGTTGAGAAAATTCAAATTGAGCTTGAACAATACGAAAGAGAT ATAGCACTTTCTAATAAGCAAATAGGTGCTATGTTAAATGAAAACTTTGAGTTTTACAATGAACTTCAAAAATATATTGT TGCTGGAGAAATGGCAATAGAAGAAATGGATAATGAAATACTACCTTTCTTTAAACAAAAATCAGAGACTAGTGGAGACC AAATGGATGTTGTCAATTATCAAGAACTATTAAAAGTTTATGATATGTTAAATCAAAGAGTCTATGATTTAAGGATAGCA GAAAATATAGCTATCCAAACAATACCTATGCTTAGAGGTATGCAACATAATAATTATGGTTTAATTAGAAAAATAAATAG TGCATTTGTCGTAACTTTACCAGTATTTAAACAATGTTTATCTCAAGCTATATTACTTAAAAAGCAAGAATTACAAGCAA AATCTCTAAAAGCACTTGATGACAAAACTAATGAATTATTGCTTAGAAATGCACAAAATGTAAGTACTCAAAGTGCACAA ATAGCTAGAATGGCTGGAACAAGTTCTGTTCAAATAGAAACATTGGAAAAAATGTACAATACTATCAAATCTGGTATAGA TGAAACTATGAGAATAGAAGAAAACAATAGAGCTTTAATTAAGGATAATACAAAGAGATTGGAAGAATTAAATACGACTA TAATTTATAATAAGTAG
Upstream 100 bases:
>100_bases ACACAGATTGGATAAAATGGTATATGACCTTAAATTAAATTCGCTTGAAAATGATATACCTTTACTTAAAAAAATTTTTG GAAAGAGGAGACGATTTTAG
Downstream 100 bases:
>100_bases TATTATATTAAGGGCTAATTTGTATAAAGTTGGCCCTTTCTATGTATATGAGGAGGCTAGACATTGAAATATTTCGATTA TATCTGCAAAGATGATTTGG
Product: tellurite resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MGININSFSKDKNSVEVTENLPTAVQEENFDIMEYTNNKKNELRKSKEVEALTSLIEVENPDTILQFGRKASEGVARVSD SLLNTIKLNRNEENSKMLVHLTKIMDKFDLDDFQETKEPNFVQKLFKKANNAIEMMFQKYETLGGEVEKIQIELEQYERD IALSNKQIGAMLNENFEFYNELQKYIVAGEMAIEEMDNEILPFFKQKSETSGDQMDVVNYQELLKVYDMLNQRVYDLRIA ENIAIQTIPMLRGMQHNNYGLIRKINSAFVVTLPVFKQCLSQAILLKKQELQAKSLKALDDKTNELLLRNAQNVSTQSAQ IARMAGTSSVQIETLEKMYNTIKSGIDETMRIEENNRALIKDNTKRLEELNTTIIYNK
Sequences:
>Translated_378_residues MGININSFSKDKNSVEVTENLPTAVQEENFDIMEYTNNKKNELRKSKEVEALTSLIEVENPDTILQFGRKASEGVARVSD SLLNTIKLNRNEENSKMLVHLTKIMDKFDLDDFQETKEPNFVQKLFKKANNAIEMMFQKYETLGGEVEKIQIELEQYERD IALSNKQIGAMLNENFEFYNELQKYIVAGEMAIEEMDNEILPFFKQKSETSGDQMDVVNYQELLKVYDMLNQRVYDLRIA ENIAIQTIPMLRGMQHNNYGLIRKINSAFVVTLPVFKQCLSQAILLKKQELQAKSLKALDDKTNELLLRNAQNVSTQSAQ IARMAGTSSVQIETLEKMYNTIKSGIDETMRIEENNRALIKDNTKRLEELNTTIIYNK >Mature_377_residues GININSFSKDKNSVEVTENLPTAVQEENFDIMEYTNNKKNELRKSKEVEALTSLIEVENPDTILQFGRKASEGVARVSDS LLNTIKLNRNEENSKMLVHLTKIMDKFDLDDFQETKEPNFVQKLFKKANNAIEMMFQKYETLGGEVEKIQIELEQYERDI ALSNKQIGAMLNENFEFYNELQKYIVAGEMAIEEMDNEILPFFKQKSETSGDQMDVVNYQELLKVYDMLNQRVYDLRIAE NIAIQTIPMLRGMQHNNYGLIRKINSAFVVTLPVFKQCLSQAILLKKQELQAKSLKALDDKTNELLLRNAQNVSTQSAQI ARMAGTSSVQIETLEKMYNTIKSGIDETMRIEENNRALIKDNTKRLEELNTTIIYNK
Specific function: Unknown
COG id: COG3853
COG function: function code P; Uncharacterized protein involved in tellurite resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the telA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008863 [H]
Pfam domain/function: PF05816 TelA [H]
EC number: NA
Molecular weight: Translated: 43617; Mature: 43486
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGININSFSKDKNSVEVTENLPTAVQEENFDIMEYTNNKKNELRKSKEVEALTSLIEVEN CCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCC PDTILQFGRKASEGVARVSDSLLNTIKLNRNEENSKMLVHLTKIMDKFDLDDFQETKEPN CHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCH FVQKLFKKANNAIEMMFQKYETLGGEVEKIQIELEQYERDIALSNKQIGAMLNENFEFYN HHHHHHHHHHHHHHHHHHHHHHHCCCEEHEEEHHHHHHHHHHCCCHHHHHHHHCCHHHHH ELQKYIVAGEMAIEEMDNEILPFFKQKSETSGDQMDVVNYQELLKVYDMLNQRVYDLRIA HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHH ENIAIQTIPMLRGMQHNNYGLIRKINSAFVVTLPVFKQCLSQAILLKKQELQAKSLKALD CCHHHHEEHHHHCCCCCCCHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKTNELLLRNAQNVSTQSAQIARMAGTSSVQIETLEKMYNTIKSGIDETMRIEENNRALI CCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCEEE KDNTKRLEELNTTIIYNK CCCHHHHHHCCCEEEECC >Mature Secondary Structure GININSFSKDKNSVEVTENLPTAVQEENFDIMEYTNNKKNELRKSKEVEALTSLIEVEN CCCCCCCCCCCCCEEECCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCC PDTILQFGRKASEGVARVSDSLLNTIKLNRNEENSKMLVHLTKIMDKFDLDDFQETKEPN CHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCH FVQKLFKKANNAIEMMFQKYETLGGEVEKIQIELEQYERDIALSNKQIGAMLNENFEFYN HHHHHHHHHHHHHHHHHHHHHHHCCCEEHEEEHHHHHHHHHHCCCHHHHHHHHCCHHHHH ELQKYIVAGEMAIEEMDNEILPFFKQKSETSGDQMDVVNYQELLKVYDMLNQRVYDLRIA HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHH ENIAIQTIPMLRGMQHNNYGLIRKINSAFVVTLPVFKQCLSQAILLKKQELQAKSLKALD CCHHHHEEHHHHCCCCCCCHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKTNELLLRNAQNVSTQSAQIARMAGTSSVQIETLEKMYNTIKSGIDETMRIEENNRALI CCHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCEEE KDNTKRLEELNTTIIYNK CCCHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]