| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126699238
Identifier: 126699238
GI number: 126699238
Start: 1894419
End: 1894997
Strand: Direct
Name: 126699238
Synonym: CD1634
Alternate gene names: NA
Gene position: 1894419-1894997 (Clockwise)
Preceding gene: 126699236
Following gene: 126699239
Centisome position: 44.16
GC content: 32.3
Gene sequence:
>579_bases ATGGGTATAACATTATCAAAAGGCCAAAAGGTTGATTTAACTAAAGGAAATCCAGGTCTTAAAAATATTTTAGTAGGTTT AGGATGGGATACTAACAAGTATGATGGTGGATTTGACTTTGATTTAGATACAGCAGCATTTTTAACAGGAGCAAGTGGAA GTGTTACTAATGATGGAGATTTTGTATTTTACAACAATTTAAAACATACATCTGGAGCAGTTGAGCATCTAGGAGATAAC AGAACTGGCGAAGGTGATGGAGATGATGAACAAATAGTTGTTGATTTATCTAAGATTCCTGGAGAAATAAGCAAGATTTC TTTTACTGTTACAATTCATGATGCGACAGAAAGAAGACAAAATTTTGGACAAGTAAGTAATTCTTATATAAGAATAGTAG ATAAAGACACAAATGAAGAGTTAATAAAGTATGAATTAGGAGAAGATTTTAGTATAGAAACAGCTATAGTAGTAGCTGAA ATATATAAGCACAATGGAGAATGGAAGTTTAATGCACTAGGTTCTGGCTTTGAAGGTGGTCTTGCTGCATTATGTGGAAA CTTTGGAATAAACTTATAA
Upstream 100 bases:
>100_bases TTCTTCACAAATGAATAAAAAATGTTATAATATGATTAAAGAAAAAGATAAATAATTAGCAAGATTTGTTTAGCTAAAAT TAACAAGGGAGCGATAAATT
Downstream 100 bases:
>100_bases TTTCAACTATAACAATAAACTAAAGGGGGATATTTTCCATGGCTATAGTATTAAAAAAAGGACAAAAAATCGATTTAACT AAGGGAAATCCAGGTCTTAA
Product: tellurium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGITLSKGQKVDLTKGNPGLKNILVGLGWDTNKYDGGFDFDLDTAAFLTGASGSVTNDGDFVFYNNLKHTSGAVEHLGDN RTGEGDGDDEQIVVDLSKIPGEISKISFTVTIHDATERRQNFGQVSNSYIRIVDKDTNEELIKYELGEDFSIETAIVVAE IYKHNGEWKFNALGSGFEGGLAALCGNFGINL
Sequences:
>Translated_192_residues MGITLSKGQKVDLTKGNPGLKNILVGLGWDTNKYDGGFDFDLDTAAFLTGASGSVTNDGDFVFYNNLKHTSGAVEHLGDN RTGEGDGDDEQIVVDLSKIPGEISKISFTVTIHDATERRQNFGQVSNSYIRIVDKDTNEELIKYELGEDFSIETAIVVAE IYKHNGEWKFNALGSGFEGGLAALCGNFGINL >Mature_191_residues GITLSKGQKVDLTKGNPGLKNILVGLGWDTNKYDGGFDFDLDTAAFLTGASGSVTNDGDFVFYNNLKHTSGAVEHLGDNR TGEGDGDDEQIVVDLSKIPGEISKISFTVTIHDATERRQNFGQVSNSYIRIVDKDTNEELIKYELGEDFSIETAIVVAEI YKHNGEWKFNALGSGFEGGLAALCGNFGINL
Specific function: Not known; could confer methyl methane sulfonate (MMS), mitomycin C (MC), and UV resistance [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20761; Mature: 20630
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITLSKGQKVDLTKGNPGLKNILVGLGWDTNKYDGGFDFDLDTAAFLTGASGSVTNDGD CCEECCCCCEEEEECCCCCHHHEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC FVFYNNLKHTSGAVEHLGDNRTGEGDGDDEQIVVDLSKIPGEISKISFTVTIHDATERRQ EEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEHHHCCCCEEEEEEEEEEECHHHHHH NFGQVSNSYIRIVDKDTNEELIKYELGEDFSIETAIVVAEIYKHNGEWKFNALGSGFEGG HHHCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHEEEEHHHCCCCEEEEECCCCCCCC LAALCGNFGINL HHHHHHHCCCCC >Mature Secondary Structure GITLSKGQKVDLTKGNPGLKNILVGLGWDTNKYDGGFDFDLDTAAFLTGASGSVTNDGD CEECCCCCEEEEECCCCCHHHEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC FVFYNNLKHTSGAVEHLGDNRTGEGDGDDEQIVVDLSKIPGEISKISFTVTIHDATERRQ EEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEHHHCCCCEEEEEEEEEEECHHHHHH NFGQVSNSYIRIVDKDTNEELIKYELGEDFSIETAIVVAEIYKHNGEWKFNALGSGFEGG HHHCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHEEEEHHHCCCCEEEEECCCCCCCC LAALCGNFGINL HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7765497 [H]