| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699239
Identifier: 126699239
GI number: 126699239
Start: 1895036
End: 1895614
Strand: Direct
Name: 126699239
Synonym: CD1635
Alternate gene names: NA
Gene position: 1895036-1895614 (Clockwise)
Preceding gene: 126699238
Following gene: 126699240
Centisome position: 44.17
GC content: 31.26
Gene sequence:
>579_bases ATGGCTATAGTATTAAAAAAAGGACAAAAAATCGATTTAACTAAGGGAAATCCAGGTCTTAAAAATATAAAACTTGGACT AGGATGGGATACAAATTCATTTGATAGTGGCTATGATTATGATTTAGATGTAAGTGTTTTCATGGTTGGAGAATCTCAAA GAGTTGAAAAAGATGAAGATTTTATATTCTACAATAACTTAAAACATCCATCTGGAGCAGTTGAACACTTAGGTGATAAT AGAACTGGTGAAGGTGATGGAGATGATGAGGAAATATTAGTGAATTTAGAGACAATGCCAAAGCATATACAAAAGATAGC TGTAACAGTTACAATATATGAGGCTGCTGAAAGAAGACAAAATTTTGGACAAGTAAGTAACTCATATATAAGAGTATTAA ATTCTGAAAATGATGAAGAAATATTAAGATATGACTTAGGTGAAGAATTTAGTATAGAAACTGCAATTACAGTATGTGAG ATATATAAGTATAATGGAGAATGGAAGTTTAGTGCAGTTGGAGCAGGATTTGAAGGTGGCTTAGAGGCACTTTGTAGAAA CTATGGCTTAAATGTTTAA
Upstream 100 bases:
>100_bases TAGGTTCTGGCTTTGAAGGTGGTCTTGCTGCATTATGTGGAAACTTTGGAATAAACTTATAATTTCAACTATAACAATAA ACTAAAGGGGGATATTTTCC
Downstream 100 bases:
>100_bases TTTAAGCAATATAATATATTAAATATAAATAACCTATACAAATAATGTATAGGTTATATTATATAAAATTTTGTGGAGGT TTAGTATGTCGATTAATTTA
Product: tellurium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAIVLKKGQKIDLTKGNPGLKNIKLGLGWDTNSFDSGYDYDLDVSVFMVGESQRVEKDEDFIFYNNLKHPSGAVEHLGDN RTGEGDGDDEEILVNLETMPKHIQKIAVTVTIYEAAERRQNFGQVSNSYIRVLNSENDEEILRYDLGEEFSIETAITVCE IYKYNGEWKFSAVGAGFEGGLEALCRNYGLNV
Sequences:
>Translated_192_residues MAIVLKKGQKIDLTKGNPGLKNIKLGLGWDTNSFDSGYDYDLDVSVFMVGESQRVEKDEDFIFYNNLKHPSGAVEHLGDN RTGEGDGDDEEILVNLETMPKHIQKIAVTVTIYEAAERRQNFGQVSNSYIRVLNSENDEEILRYDLGEEFSIETAITVCE IYKYNGEWKFSAVGAGFEGGLEALCRNYGLNV >Mature_191_residues AIVLKKGQKIDLTKGNPGLKNIKLGLGWDTNSFDSGYDYDLDVSVFMVGESQRVEKDEDFIFYNNLKHPSGAVEHLGDNR TGEGDGDDEEILVNLETMPKHIQKIAVTVTIYEAAERRQNFGQVSNSYIRVLNSENDEEILRYDLGEEFSIETAITVCEI YKYNGEWKFSAVGAGFEGGLEALCRNYGLNV
Specific function: Not known; could confer methyl methane sulfonate (MMS), mitomycin C (MC), and UV resistance [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 21532; Mature: 21401
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVLKKGQKIDLTKGNPGLKNIKLGLGWDTNSFDSGYDYDLDVSVFMVGESQRVEKDED CEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC FIFYNNLKHPSGAVEHLGDNRTGEGDGDDEEILVNLETMPKHIQKIAVTVTIYEAAERRQ EEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHEEEEEEEEHHHHHHH NFGQVSNSYIRVLNSENDEEILRYDLGEEFSIETAITVCEIYKYNGEWKFSAVGAGFEGG HHHHHCCCEEEEECCCCCHHHHHCCCCCCCCHHHHEEEEEEEEECCCEEEEEECCCCCHH LEALCRNYGLNV HHHHHHHCCCCC >Mature Secondary Structure AIVLKKGQKIDLTKGNPGLKNIKLGLGWDTNSFDSGYDYDLDVSVFMVGESQRVEKDED EEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC FIFYNNLKHPSGAVEHLGDNRTGEGDGDDEEILVNLETMPKHIQKIAVTVTIYEAAERRQ EEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHEEEEEEEEHHHHHHH NFGQVSNSYIRVLNSENDEEILRYDLGEEFSIETAITVCEIYKYNGEWKFSAVGAGFEGG HHHHHCCCEEEEECCCCCHHHHHCCCCCCCCHHHHEEEEEEEEECCCEEEEEECCCCCHH LEALCRNYGLNV HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7765497 [H]