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The map label for this gene is xylR [H]

Identifier: 126699188

GI number: 126699188

Start: 1836761

End: 1837864

Strand: Direct

Name: xylR [H]

Synonym: CD1584

Alternate gene names: 126699188

Gene position: 1836761-1837864 (Clockwise)

Preceding gene: 126699185

Following gene: 126699189

Centisome position: 42.81

GC content: 25.72

Gene sequence:

>1104_bases
GTGTTGTCTATGAAAAATATAGTTGGAAAACCGCAAACGATAAAAAAAGTAAATGAAGATTTAATAAAAAACATTATAAA
AAATGAAGGTCCTATAACAAAACCAGAAATTTCAAGCATTACTGAATTGAGTTTAGCTACAGTTAATAAGATTGTAGAGC
AATTAGCTTTGAAAAATGAAGTTAAAGTAAGTGGACTAAGTGAATCTACTGGAGGAAGAAGAGCTCAATTATTTGAAATA
AATGCAAACTTAGAACACATAATAGCTTTATATTATTATAGAAATTGTTGTATAGGGGTAGTTGCCAATTTATTAGGTGA
AATAATTTATCAAGAAGAATTTAATATAAGAATGGATACGTATGAAAACGTTAACCAAGATACTTTTTTTGTTATAGATA
CTCTAATAAAAAAGGAAAAAGGAAACAATATAAGGGCTATTGGAATTGGTGTCCCAGGAGTTGTAAAAAAAGGTGTAGTT
AAAAATATACCAACTATAAAAAGTTGGGAAGGTATAAATTTAGAAAATTTAATAAAGAGTAAATACAATACTAAAGTGTT
TATAGAAAATGATACAAATATTACTACTATTGGGATTTATCAAAAACAGTATAAAGACAAATATAAAAATATGGCTCTTA
TGTATTTAGAAGATGGTATTGGTTCAGGTATAGTTATAAATGGTGAATTGTATTTAGGTTCTACAAATTTTGCTGGAGAG
TTAAGTTATCTAAATATAGAATTTGGTAAGTATAACTCTAACAACTTAAATCTTGAAGATTATATTATGAGTTTAAGAAA
AAGATATTTAGAAAGTAAAGATAATAAATTTAAGAAAGAAATTTTATCTATAATATCAAACTTTATAAGGACTCTTGTAT
GTGTCCTAAATCCACAAGCTATGATTATACAGTGTAGTATATTAACCAAGAGTGACATGGAGTTTATAGAAAAAGATGTA
AGCAATAATGTTGGAGAAGAAAATTTTCCTAAATTAATAAAAGTAGAGTCATTGAGAGAAGGAAGTATAAATGGAGTAAT
TAGTATGTGTTTAAAAGAAACTGACTATCAATATTCCTTATCTAATAAAAAAGGAGGATATTAA

Upstream 100 bases:

>100_bases
CAATTGAGAAATTTGATTTTAAAGTTTTATTGAAAATTTATTGACAAATTTAACTTGTAAATATTATACTAAACTTAATA
AATAAAGTTTATAAAGTAAG

Downstream 100 bases:

>100_bases
TGTGAAATATTTGGTTTCAATAGATGGAGGGGGAACAAAAACTAAATTTTGTGTAAGTGACTTAGATGGAAACATACTTA
AAGAACATACCACTGGTTCA

Product: sugar metabolism repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLSMKNIVGKPQTIKKVNEDLIKNIIKNEGPITKPEISSITELSLATVNKIVEQLALKNEVKVSGLSESTGGRRAQLFEI
NANLEHIIALYYYRNCCIGVVANLLGEIIYQEEFNIRMDTYENVNQDTFFVIDTLIKKEKGNNIRAIGIGVPGVVKKGVV
KNIPTIKSWEGINLENLIKSKYNTKVFIENDTNITTIGIYQKQYKDKYKNMALMYLEDGIGSGIVINGELYLGSTNFAGE
LSYLNIEFGKYNSNNLNLEDYIMSLRKRYLESKDNKFKKEILSIISNFIRTLVCVLNPQAMIIQCSILTKSDMEFIEKDV
SNNVGEENFPKLIKVESLREGSINGVISMCLKETDYQYSLSNKKGGY

Sequences:

>Translated_367_residues
MLSMKNIVGKPQTIKKVNEDLIKNIIKNEGPITKPEISSITELSLATVNKIVEQLALKNEVKVSGLSESTGGRRAQLFEI
NANLEHIIALYYYRNCCIGVVANLLGEIIYQEEFNIRMDTYENVNQDTFFVIDTLIKKEKGNNIRAIGIGVPGVVKKGVV
KNIPTIKSWEGINLENLIKSKYNTKVFIENDTNITTIGIYQKQYKDKYKNMALMYLEDGIGSGIVINGELYLGSTNFAGE
LSYLNIEFGKYNSNNLNLEDYIMSLRKRYLESKDNKFKKEILSIISNFIRTLVCVLNPQAMIIQCSILTKSDMEFIEKDV
SNNVGEENFPKLIKVESLREGSINGVISMCLKETDYQYSLSNKKGGY
>Mature_367_residues
MLSMKNIVGKPQTIKKVNEDLIKNIIKNEGPITKPEISSITELSLATVNKIVEQLALKNEVKVSGLSESTGGRRAQLFEI
NANLEHIIALYYYRNCCIGVVANLLGEIIYQEEFNIRMDTYENVNQDTFFVIDTLIKKEKGNNIRAIGIGVPGVVKKGVV
KNIPTIKSWEGINLENLIKSKYNTKVFIENDTNITTIGIYQKQYKDKYKNMALMYLEDGIGSGIVINGELYLGSTNFAGE
LSYLNIEFGKYNSNNLNLEDYIMSLRKRYLESKDNKFKKEILSIISNFIRTLVCVLNPQAMIIQCSILTKSDMEFIEKDV
SNNVGEENFPKLIKVESLREGSINGVISMCLKETDYQYSLSNKKGGY

Specific function: Transcriptional repressor of xylose-utilizing enzymes [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=282, Percent_Identity=21.9858156028369, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 41506; Mature: 41506

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMKNIVGKPQTIKKVNEDLIKNIIKNEGPITKPEISSITELSLATVNKIVEQLALKNE
CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VKVSGLSESTGGRRAQLFEINANLEHIIALYYYRNCCIGVVANLLGEIIYQEEFNIRMDT
CEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
YENVNQDTFFVIDTLIKKEKGNNIRAIGIGVPGVVKKGVVKNIPTIKSWEGINLENLIKS
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
KYNTKVFIENDTNITTIGIYQKQYKDKYKNMALMYLEDGIGSGIVINGELYLGSTNFAGE
CCCCEEEEECCCCEEEEEEHHHHHHHHHHCEEEEEEECCCCCCEEEEEEEEECCCCCCCE
LSYLNIEFGKYNSNNLNLEDYIMSLRKRYLESKDNKFKKEILSIISNFIRTLVCVLNPQA
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
MIIQCSILTKSDMEFIEKDVSNNVGEENFPKLIKVESLREGSINGVISMCLKETDYQYSL
EEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEE
SNKKGGY
CCCCCCC
>Mature Secondary Structure
MLSMKNIVGKPQTIKKVNEDLIKNIIKNEGPITKPEISSITELSLATVNKIVEQLALKNE
CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VKVSGLSESTGGRRAQLFEINANLEHIIALYYYRNCCIGVVANLLGEIIYQEEFNIRMDT
CEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
YENVNQDTFFVIDTLIKKEKGNNIRAIGIGVPGVVKKGVVKNIPTIKSWEGINLENLIKS
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
KYNTKVFIENDTNITTIGIYQKQYKDKYKNMALMYLEDGIGSGIVINGELYLGSTNFAGE
CCCCEEEEECCCCEEEEEEHHHHHHHHHHCEEEEEEECCCCCCEEEEEEEEECCCCCCCE
LSYLNIEFGKYNSNNLNLEDYIMSLRKRYLESKDNKFKKEILSIISNFIRTLVCVLNPQA
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
MIIQCSILTKSDMEFIEKDVSNNVGEENFPKLIKVESLREGSINGVISMCLKETDYQYSL
EEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEE
SNKKGGY
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2544559 [H]