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The map label for this gene is 126699176

Identifier: 126699176

GI number: 126699176

Start: 1821726

End: 1822940

Strand: Direct

Name: 126699176

Synonym: CD1573

Alternate gene names: NA

Gene position: 1821726-1822940 (Clockwise)

Preceding gene: 126699175

Following gene: 126699178

Centisome position: 42.46

GC content: 25.84

Gene sequence:

>1215_bases
ATGCAAATTAAAATAGGTAAAGTCATACAGCGTCTTAGAAAAGAACGAAATTTAACTCAAGAACAATTAGCAAAGTTTAT
AGGTGTGTCAACACCAGCAGTATCTAAGTGGGAGAGTGGAAATTCTTACCCAGATATAGAATTATTGCCTTTATTAGCAG
ACTTTTTTAATGTGTCTATTGATAAGCTTTTAAATTACAAGATTGATTTAAGTGAAGAAGAAGTAATGAAAATTTATAAA
GAATTAGAATCAGGCTTTGCTAAAATTGAAATTGATTTATCAACAGAAGAACCAAAAGAAGAATTTAGACAAGACTTAGA
ATCTGTAAAAAAGCTTTCCAATATGTATATAGAGAAGTATCCTAAAAGCTATTTATTGAAGCTAAGGATATGTTCGCTGT
ATCAGATGTATTCATATAAATTTGGTAAGAGTGAACTTAATGACAGAGTAAAAGAAACAACGAATATTCTTGAAGATATA
GTGAGAAATACAGATGATATCCAAATAAAAGAAACAGCTCTTATTATATTATCAAACGCATATTGTATGTTGGAGGATTA
TGAAAAGGCAGAGTTGTATTTAAATATGATACATAAGTCAATAGGGGATACAAGTGTTAATTTAGCTATGATATATTTAA
AGCAAAATAGACTTGAAGAAGCAGAAATATTGCTTCAAAATAAATTGTTTAGTAATGTATTTAATATAAGCATGGATTGT
AAGGGAATAATTAATGTATACAAAAATCAATACAAGGAATTAAAGAAAAAATTGGAGAATAGAAATTTTAATAAAAATGC
AATTGAGAGAGAAATGGAGTATATAAAAAATAAGTTGCTGGGGTATGCAAATCTTTCTTTAGAAATAAAAAAAATGCTCA
GTGAAGATAAAGGTGCATTTTTTAGTATGTATATGGATTATATGGAATTATCTCTAATTTTTTTATTTTTTAACATGAAA
GAAGAAGCAAAAAAAGCCTTATATAGTCTAAAAGAAATATTAGAAAAATATCCTATACATGAAAGTTTGGATGTAAGTCA
AATGAGATTTTTTGATAAGGTAGAGTCTAAAAATTTATATACTTTTAATATATATACAAACTTGTTAATTGTACTTAATG
ATGATAGTTATAATGAGCTTAGAGAAGAACCAATTTTTAAGGATGTAATTGAAAAGATTTTAGATATGGAAAAAATGTTG
AAAAATAAAGAATAA

Upstream 100 bases:

>100_bases
AATGGTTAAATTACAGACATTTTGTTAACTTTCCCTCGATTTACTAGTAAATATTTTTTTAATATACTTAAATTACAACA
GATGTACTAGGGAGGTATAT

Downstream 100 bases:

>100_bases
GTAAAAATTTAATATAGGATTTAAAGATTAATCAAATTAAAAGAAAGTGTTTCAAAATAAAAATTTGAATTACCTTTTTT
GTCGGTCTTAAACAGTTATT

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; HTH Domain-Containing Protein; Transcriptional Regulator Xre Family; Helix-Turn-Helix Domain-Containing Protein; HTH/TPR Domain-Containing Protein; HTH Motif Containing Protein; Helix-Turn-Helix Protein; Transcriptional Regulatory Protein; Prophage; Transcriptional Regulator Domain-Containing Protein; HTH Domain Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MQIKIGKVIQRLRKERNLTQEQLAKFIGVSTPAVSKWESGNSYPDIELLPLLADFFNVSIDKLLNYKIDLSEEEVMKIYK
ELESGFAKIEIDLSTEEPKEEFRQDLESVKKLSNMYIEKYPKSYLLKLRICSLYQMYSYKFGKSELNDRVKETTNILEDI
VRNTDDIQIKETALIILSNAYCMLEDYEKAELYLNMIHKSIGDTSVNLAMIYLKQNRLEEAEILLQNKLFSNVFNISMDC
KGIINVYKNQYKELKKKLENRNFNKNAIEREMEYIKNKLLGYANLSLEIKKMLSEDKGAFFSMYMDYMELSLIFLFFNMK
EEAKKALYSLKEILEKYPIHESLDVSQMRFFDKVESKNLYTFNIYTNLLIVLNDDSYNELREEPIFKDVIEKILDMEKML
KNKE

Sequences:

>Translated_404_residues
MQIKIGKVIQRLRKERNLTQEQLAKFIGVSTPAVSKWESGNSYPDIELLPLLADFFNVSIDKLLNYKIDLSEEEVMKIYK
ELESGFAKIEIDLSTEEPKEEFRQDLESVKKLSNMYIEKYPKSYLLKLRICSLYQMYSYKFGKSELNDRVKETTNILEDI
VRNTDDIQIKETALIILSNAYCMLEDYEKAELYLNMIHKSIGDTSVNLAMIYLKQNRLEEAEILLQNKLFSNVFNISMDC
KGIINVYKNQYKELKKKLENRNFNKNAIEREMEYIKNKLLGYANLSLEIKKMLSEDKGAFFSMYMDYMELSLIFLFFNMK
EEAKKALYSLKEILEKYPIHESLDVSQMRFFDKVESKNLYTFNIYTNLLIVLNDDSYNELREEPIFKDVIEKILDMEKML
KNKE
>Mature_404_residues
MQIKIGKVIQRLRKERNLTQEQLAKFIGVSTPAVSKWESGNSYPDIELLPLLADFFNVSIDKLLNYKIDLSEEEVMKIYK
ELESGFAKIEIDLSTEEPKEEFRQDLESVKKLSNMYIEKYPKSYLLKLRICSLYQMYSYKFGKSELNDRVKETTNILEDI
VRNTDDIQIKETALIILSNAYCMLEDYEKAELYLNMIHKSIGDTSVNLAMIYLKQNRLEEAEILLQNKLFSNVFNISMDC
KGIINVYKNQYKELKKKLENRNFNKNAIEREMEYIKNKLLGYANLSLEIKKMLSEDKGAFFSMYMDYMELSLIFLFFNMK
EEAKKALYSLKEILEKYPIHESLDVSQMRFFDKVESKNLYTFNIYTNLLIVLNDDSYNELREEPIFKDVIEKILDMEKML
KNKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47882; Mature: 47882

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKIGKVIQRLRKERNLTQEQLAKFIGVSTPAVSKWESGNSYPDIELLPLLADFFNVSI
CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DKLLNYKIDLSEEEVMKIYKELESGFAKIEIDLSTEEPKEEFRQDLESVKKLSNMYIEKY
HHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
PKSYLLKLRICSLYQMYSYKFGKSELNDRVKETTNILEDIVRNTDDIQIKETALIILSNA
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEEEEEECC
YCMLEDYEKAELYLNMIHKSIGDTSVNLAMIYLKQNRLEEAEILLQNKLFSNVFNISMDC
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCH
KGIINVYKNQYKELKKKLENRNFNKNAIEREMEYIKNKLLGYANLSLEIKKMLSEDKGAF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHCCCHH
FSMYMDYMELSLIFLFFNMKEEAKKALYSLKEILEKYPIHESLDVSQMRFFDKVESKNLY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEE
TFNIYTNLLIVLNDDSYNELREEPIFKDVIEKILDMEKMLKNKE
EEEEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQIKIGKVIQRLRKERNLTQEQLAKFIGVSTPAVSKWESGNSYPDIELLPLLADFFNVSI
CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DKLLNYKIDLSEEEVMKIYKELESGFAKIEIDLSTEEPKEEFRQDLESVKKLSNMYIEKY
HHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
PKSYLLKLRICSLYQMYSYKFGKSELNDRVKETTNILEDIVRNTDDIQIKETALIILSNA
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEEEEEECC
YCMLEDYEKAELYLNMIHKSIGDTSVNLAMIYLKQNRLEEAEILLQNKLFSNVFNISMDC
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCH
KGIINVYKNQYKELKKKLENRNFNKNAIEREMEYIKNKLLGYANLSLEIKKMLSEDKGAF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHCCCHH
FSMYMDYMELSLIFLFFNMKEEAKKALYSLKEILEKYPIHESLDVSQMRFFDKVESKNLY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEE
TFNIYTNLLIVLNDDSYNELREEPIFKDVIEKILDMEKMLKNKE
EEEEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA